1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTTTCTCCCTTCCCGAGAGGCCACGCTCCATCCCCGCCCGCGCTGCCTCCCCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttccttgctttcctctacgcgttgctcctgccgttacgcaaactttatgtgatcccttcctcgctgaacgagatgagaagaaaagttgctgac...
species | Zea mays |
transcript | GRMZM2G040843_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCTEST: gi|211426924|gb|FL424657.1|FL424657
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCTEST: gi|78180271|gb|DV550644.1|DV550644
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCTEST: gi|8577269|gb|BE129906.1|BE129906
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCTEST: gi|211227715|gb|FL394172.1|FL394172
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCTEST: gi|148956077|gb|EC901831.2|EC901831
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
EST: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCG ACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
genomic: CCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttc ... cttcttgcagACGCTGGGCGGACTGGGAACAAGCGCCAATGGGGATCGCGGTGGTGGCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTTCTCCCTTCCCGAGAGGCCACGCTCCATCCCCGCCCGCGCTGCCTCCCCTGGCGATCGGCGGCGACCGCGGCCCAACGAAAGCGTCGTGGTCGGCCGgtaagagttccttgctttcctctacgcgttgctcctgccgttacgcaaactttatgtgatcccttcctcgctgaacgagatgagaagaaaagttgctgac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttcctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaaaag