1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ATCGCCCGCTCCGCACGCTCGATCCCACCCAGGACCACAAGCTCATGTTCGGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtcctacttctcgatcttctagcactcgtgtgagcgattatctattgagacggccgttagtcggaactcggaaataatttctcatcgattctgcat...
species | Zea mays |
transcript | GRMZM2G039373_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTCEST: gi|148956259|gb|EC902056.2|EC902056
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTCEST: gi|211273196|gb|FL267859.1|FL267859
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGSCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGSTGCCAGGCCAAGGTTGCTCEST: gi|211273198|gb|FL267861.1|FL267861
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTCEST: gi|211273200|gb|FL267863.1|FL267863
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGCTGANAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTCEST: gi|211273197|gb|FL267860.1|FL267860
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGNTGAAAAGGGAAATCTTGGAGEST: gi|94473829|gb|EB702787.1|EB702787
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAG
EST: GGACTCCTCTTCTCCCTTCGCTCTTTCACCGCCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTCEST: gi|211273201|gb|FL267864.1|FL267864
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
EST: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCAC GGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
genomic: GGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtccta ... tcaaatgcagGGCTGAAAAGGGAAATCTTGGAGTGCCACTGCTGCCAGGCCAAGGTTGCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCGCCCGCTCCGCACGCTCGATCCCACCCAGGACCACAAGCTCATGTTCGGACTCCTCTTCTCCCTTCGCTCCTTCACCGCCAAGATCGACCCAACCACgtacgtcctacttctcgatcttctagcactcgtgtgagcgattatctattgagacggccgttagtcggaactcggaaataatttctcatcgattctgcat
- - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaataa