Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29130583|gb|CB381287.1|CB381287EST: GTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|5468863|gb|AI834654.1|AI834654EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|28984929|gb|BQ539309.2|BQ539309EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|5152838|gb|AI759136.1|AI759136EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|211316184|gb|FL331849.1|FL331849EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|16921346|gb|BM075107.1|BM075107EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|16377325|gb|BI991866.1|BI991866EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|12969776|gb|BG266651.1|BG266651EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAGCTGGCAGCTGCTGTGCCACAAGCGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
EST:
gi|91875123|gb|EB405080.1|EB405080EST: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGG GAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
genomic: GCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagac ... ggtgaaccagGAACATACTAGGTCAACTGGCAGCTGCTGTGCCACAAACGCTGACAGTTAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGCTAGGTAAACAAAACCCACAAATTCTGCGGTTGATTCAGGAAAATCAAGCTGAGTTTCTCCGCTTGGTGAATGAATCTCCTGAGGGTGGTCCTGGAGGgtaagcagactgcataattatgttaagtcatgggtacttcaggtgcataattatggtaatgagtcatgggagaaattttttacattgtgctctggtgaaccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG