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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctcttcccctcgtggatcggatgtggggctctcatatttctgatcccgtttgcggctaggctagtgttttactctctgtgatacggtatagat...

Basic information

species Zea mays
transcript GRMZM2G030784_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G030784_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os01g05490.2 (Oryza sativa), 5'ss of exon 1
-CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctcttcccctcgtggatcggatgtggggctctcatatttctg-atcccgtttgc---ggctaggctagtgttttactctctgtgatacggtatagat
  | || | | | |  | ||  ||   ||  | ||   | ||||||||  |  |||  |||||||||||||||||||||||| ||||||||||||||||||||||||| | ||| | || ||  |   || |   | || ||| ||  ||  || || |  |   ||  |   |    ||||  | |||||  |           
CTCTTCCCCCCCCCCCCCCCCCCCCCCGCGTC-CAGTTCCATCTAATCAGCTTCTCGTCGAGATGGGCCGCAAGTTCTTCGTTGGTGGCAACTGGAAATGCgtaattttt-ttctcttcctgcttgaaatctctag-tcgcatgttcttgtgtctcggtgactcaggagaatttttgatttttttttctgttctggaacgcga--

upper sequence: GRMZM2G030784_T01 (Zea mays), 5'ss of exon 1
lower sequence: EFJ37925 (Selaginella moellendorffii), 5'ss of exon 1
CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctcttcccctcgtggatcggatgtggggctctcatatttctgatcccgtttgcggctaggctagtgttttactctctgtgatacggtatagat
                                                             |||   |||||||| |  ||||||||||||||||||||||||| | || |          || |     |||    ||   ||    |    |||    |  |       | ||||  | | | |  |   |       
-------------------------------------------------------------ATGCCTCGCAAGTTTTGTGTCGGTGGCAACTGGAAATGCgtaagtgcttt----------gagctagcctgg----cttggatcatcgtcgacgtggaagaatcaaaccttttttttttttttcttgtgtag-------

upper sequence: GRMZM2G030784_T01 (Zea mays), 5'ss of exon 1
lower sequence: EFJ31929 (Selaginella moellendorffii), 5'ss of exon 1
CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctcttcccctcgtggatcggatgtggggctctcatatttctgatcccgtttgcggctaggctagtgttttactctctgtgatacggtatagat
                                                             |||   |||||||| |  ||||||||||||||||||||||||| | || |          || |     ||  |||   ||  |  |   |  |   |   | |   |  | ||||    | |||              
-------------------------------------------------------------ATGCCTCGCAAGTTTTGTGTCGGTGGCAACTGGAAATGCgtaagtgcttt----------gagctagcctg--gcttggatcatcgtcgacatggaagaatcaaacttctttttttttcttgtgtag------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|71325325|gb|DR799341.1|DR799341
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAATCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|6021111|gb|AW066039.1|AW066039
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211522695|gb|FL104750.1|FL104750
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211525699|gb|FL104762.1|FL104762
EST:     CGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AAT-GAACAACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: CGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211525698|gb|FL104761.1|FL104761
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|14569384|gb|BI097707.1|BI097707
EST:     ACCT-ACCGAGATGGGCCGC-AGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGA-TGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211419268|gb|FL091406.1|FL091406
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|5296085|gb|AI782960.1|AI782960
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|21331670|gb|BQ487051.1|BQ487051
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|13198659|gb|BG354461.1|BG354461
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|213178228|gb|FM191284.1|FM191284
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|116828082|gb|EC872041.1|EC872041
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|7216447|gb|AW562569.1|AW562569
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331048|gb|FL104687.1|FL104687
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|71323015|gb|DR798174.1|DR798174
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211324555|gb|FL104646.1|FL104646
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGTTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211531696|gb|FL104786.1|FL104786
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|76294301|gb|DV033869.1|DV033869
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211534316|gb|FL091475.1|FL091475
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31355717|gb|CD440074.1|CD440074
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|116821141|gb|EC864427.1|EC864427
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAACGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331053|gb|FL104692.1|FL104692
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|6021490|gb|AW066418.1|AW066418
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|74236492|gb|DT644406.1|DT644406
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211324554|gb|FL104645.1|FL104645
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67021074|gb|CO449823.1|CO449823
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|61236882|gb|DN586594.1|DN586594
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31355497|gb|CD439854.1|CD439854
EST:     CCTCACCGAGATGGGCCGCAAGCTT-TTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: CCTCACCGAGATGGGCCGCAAG-TTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|74235418|gb|DT643332.1|DT643332
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67034586|gb|CO463136.1|CO463136
EST:     ACCTCTTCGACATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331054|gb|FL104693.1|FL104693
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACYGGAAANGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|21760002|gb|BQ635543.1|BQ635543
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331046|gb|FL104685.1|FL104685
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211335381|gb|FL104715.1|FL104715
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|193503181|gb|AM937593.1|AM937593
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|32865187|gb|CF004869.1|CF004869
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31353766|gb|CD438123.1|CD438123
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67020068|gb|CO448817.1|CO448817
EST:     CCTCGCCGAGATGGGCCAAAAGTTCTTCGTCGGTGGCAACTGGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGG
genomic: CCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACT-GGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGG
EST: gi|7217075|gb|AW563197.1|AW563197
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGNGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331043|gb|FL104682.1|FL104682
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67012349|gb|CO441098.1|CO441098
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211335377|gb|FL104711.1|FL104711
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|32906873|gb|CF011686.1|CF011686
EST:     CCTCGCCGAGATGGGCCGCAAGGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: CCTCACCGAGATGGGCCGCAA-GTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67016932|gb|CO445681.1|CO445681
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|84980759|gb|DW531108.1|DW531108
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211528700|gb|FL104778.1|FL104778
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211531698|gb|FL104788.1|FL104788
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|7162498|gb|AW520120.1|AW520120
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|38502719|gb|CF972579.1|CF972579
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|78109161|gb|DV527578.1|DV527578
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211522688|gb|FL104743.1|FL104743
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211525697|gb|FL104760.1|FL104760
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|116813239|gb|EC855658.1|EC855658
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|7844331|gb|AW787553.1|AW787553
EST:     ACCTCGCCGAGATGGGCCGC-AGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|13558988|gb|BG550343.1|BG550343
EST:     ACCTCACCGAGATGGGCCGC-AGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31353828|gb|CD438185.1|CD438185
EST:     CCTCACCGAGATGGGCCGCAAGTTCCTT-GTAGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGATTGA
genomic: CCTCACCGAGATGGGCCGCAAGTT-CTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|38502545|gb|CF972405.1|CF972405
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67024408|gb|CO453157.1|CO453157
EST:     ACCTCCCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211528703|gb|FL104781.1|FL104781
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211522690|gb|FL104745.1|FL104745
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211528308|gb|FL091444.1|FL091444
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|20208196|gb|BQ134285.1|BQ134285
EST:     TTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGATGGA
genomic: TTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|5439487|gb|AI820408.1|AI820408
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211405979|gb|FL414494.1|FL414494
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|71433477|gb|DR814527.1|DR814527
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|29544519|gb|CB604899.1|CB604899
EST:     CCTCACCGAGATGGGCCGCAAGTTCTTCGTCGAG-GGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: CCTCACCGAGATGGGCCGCAAGTTCTTCGTCG-GTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211534318|gb|FL091477.1|FL091477
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|20208119|gb|BQ134223.1|BQ134223
EST:     AGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCTGAGAAGATTGTCAAAACCCTGAATGAAGG
genomic: AGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTC-GAGAAGATTGTCAAAACCCTGAATGAAGG
EST: gi|211522692|gb|FL104747.1|FL104747
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|29544395|gb|CB604775.1|CB604775
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGG-GGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211326711|gb|FL104652.1|FL104652
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67011680|gb|CO440429.1|CO440429
EST:     ACCTCCCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|116818645|gb|EC861693.1|EC861693
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211326719|gb|FL104660.1|FL104660
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|83278900|gb|DV942908.1|DV942908
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|8551638|gb|BE128809.1|BE128809
EST:     TGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: TGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67017841|gb|CO446590.1|CO446590
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67024324|gb|CO453073.1|CO453073
EST:     GCCGCAAGTTCTCCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: GCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31350868|gb|CD435225.1|CD435225
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211525700|gb|FL104763.1|FL104763
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|67020170|gb|CO448919.1|CO448919
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31354917|gb|CD439274.1|CD439274
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211519681|gb|FL104735.1|FL104735
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|7844330|gb|AW787552.1|AW787552
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|71332087|gb|DR802949.1|DR802949
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|101389975|gb|EB816919.1|EB816919
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|31355762|gb|CD440119.1|CD440119
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|32908761|gb|CF013574.1|CF013574
EST:     ACCTCGCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|93283118|gb|EB675382.1|EB675382
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211537328|gb|FL091492.1|FL091492
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATSSAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGG
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGAT-CAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGG
EST: gi|67035472|gb|CO464005.1|CO464005
EST:     TCCTCCCCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211331050|gb|FL104689.1|FL104689
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
EST: gi|211324558|gb|FL104649.1|FL104649
EST:     ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGC                         AATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA
genomic: ACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1183

CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGACAGGTTCCCCCTTCAGATGTTGTGG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1439

CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGACAGGTTCCCCCTTCAGATGTTGTGG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1115

CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGACAGGTTCCCCCTTCAGATGTTGTGG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2163

CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctc ... atgcgtgcagAATGGAACCACAGATCAGGTCGAGAAGATTGTCAAAACCCTGAATGAAGGACAGGTTCCCCCTTCAGATGTTGTGG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCCTCTCTCTCTCTTCGCCGTCCGAAGCTCCGCACCCCAATCTAATCGACACCTCACCGAGATGGGCCGCAAGTTCTTCGTCGGTGGCAACTGGAAATGCgtaatttctcttcccctcgtggatcggatgtggggctctcatatttctgatcccgtttgcggctaggctagtgttttactctctgtgatacggtatagat

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG