1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGCCGAGATGTCGGCAGCGGAGGCCGAGGCCATCAAGGCCAAGATCGTGGCGCACCCGCAGTACTCGGCGCTCCTCGCCGCCTACCTCGACTGCCAGAAAgtacttcgcttgagctaccccgaccccggctggcgtgacctgccgtcggaaaaaccgcatctttttttatatcttgattcgtgaagcgagatttgcttaa...
species | Zea mays |
transcript | GRMZM2G028041_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGCCGCCTACCTCGACTGCCAGAAA GTGGGCGCGCCGCCGGACGTGCTGGAGAGGCTGACGGCCATGGCGGCAAAGEST: gi|31910085|gb|CD651247.1|CD651247
genomic: CGCCGCCTACCTCGACTGCCAGAAAgtacttcgct ... gtgattgcagGTGGGCGCGCCGCCGGACGTGCTGGAGAGGCTGACGGCCATGGCGGCAAAG
EST: CGCACCCGCAGTACTCGGCGCTCCTCGCCGCCTACCTCGACTGCCAGAAA GTGGGCGCGCCGCCGGACGTGCTGGAGAGGCTGACGGCCATGGCGGCAAAG
genomic: CGCACCCGCAGTACTCGGCGCTCCTCGCCGCCTACCTCGACTGCCAGAAAgtacttcgct ... gtgattgcagGTGGGCGCGCCGCCGGACGTGCTGGAGAGGCTGACGGCCATGGCGGCAAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCGAGATGTCGGCAGCGGAGGCCGAGGCCATCAAGGCCAAGATCGTGGCGCACCCGCAGTACTCGGCGCTCCTCGCCGCCTACCTCGACTGCCAGAAAgtacttcgcttgagctaccccgaccccggctggcgtgacctgccgtcggaaaaaccgcatctttttttatatcttgattcgtgaagcgagatttgcttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccccggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaaac