1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTTCGTGATCTGGGACTCGCACGTTTTTGAGCGCGACCTGCTTCCGCGACACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggattacgcctagcctgatgctttattggatgaagctactgctaattgtttgcatgaaactttatgcttgtactgaaatagtgacctatggtatca...
species | Zea mays |
transcript | GRMZM2G026742_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTAC GGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTTEST: gi|78117796|gb|DV536183.1|DV536183
genomic: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggatta ... tcataattagGGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
EST: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTAC GGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTTEST: gi|50330832|gb|CO525958.1|CO525958
genomic: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggatta ... tcataattagGGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
EST: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTAC GGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTTEST: gi|101399805|gb|EB821749.1|EB821749
genomic: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggatta ... tcataattagGGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
EST: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTAC GGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTTEST: gi|33467771|gb|CF244820.1|CF244820
genomic: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggatta ... tcataattagGGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
EST: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTAC GGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
genomic: ACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggatta ... tcataattagGGATTTCATAAAGTTGATCCAGATAGATGGGAATGGGCCAATGAAGGTTTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTCGTGATCTGGGACTCGCACGTTTTTGAGCGCGACCTGCTTCCGCGACACTTCAAGCACAACCACTTCACCAGCTTCATACGCCAGCTCAACACCTACgtgaggattacgcctagcctgatgctttattggatgaagctactgctaattgtttgcatgaaactttatgcttgtactgaaatagtgacctatggtatca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA