Sequence
atgc intronic sequence ATGC exonic sequenceCTCTCTCTCGTGGCGACGACTGGGCGACCTCCCCGCCCCCGCCGCTCTACGCCAGGTGCCCAGATCTTCGTCGGGCCCTTCGCCGAAGAGCAGCCAACAGgtatgcgcaccccttctcttcccttcccgctgtgcgaagctgaggacccaaaccctagctgacactgttttggctatttgcgttcggatcggatctaatt...
Basic information
Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|149051652|gb|EE155766.2|EE155766EST: GCCAGGTGCCCAGATCTTCGTCGGGCCCTTCGCCGAAGAGCAGCCAACAG CTTAGGTTAAAATCNNNNNNNTTTGTCGGGCGGATAATACAAGGCCTACAC
genomic: GCCAGGTGCCCAGATCTTCGTCGGGCCCTTCGCCGAAGAGCAGCCAACAGgtatgcgcac ... tggtgtgcagCTTAGGTTAAAATCAAAAAAATTTGTCGGGCGGATAATACAAGGCCTACAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCTCTCTCGTGGCGACGACTGGGCGACCTCCCCGCCCCCGCCGCTCTACGCCAGGTGCCCAGATCTTCGTCGGGCCCTTCGCCGAAGAGCAGCCAACAGgtatgcgcaccccttctcttcccttcccgctgtgcgaagctgaggacccaaaccctagctgacactgttttggctatttgcgttcggatcggatctaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cgcaccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccttccc