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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTCTCTTAAACCCTAGCCGCTGCGCACAACAACCTGCTACTCAATTTGATCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatcgattcctcttctgctcctttgttgttgccgccggcgccggatcgatccatccgtcagtccaccggcggctgggggttctctcttgcagttgcgctgccgctcatccacggtcgcggatacattagatggatagctgagtgctgatgcaaacctccaaatttcttgcag

Basic information

species Zea mays
transcript GRMZM2G015989_T01
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211451228|gb|FL117916.1|FL117916
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211446984|gb|FL117892.1|FL117892
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451233|gb|FL117921.1|FL117921
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451231|gb|FL117919.1|FL117919
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449111|gb|FL117908.1|FL117908
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455494|gb|FL117940.1|FL117940
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453373|gb|FL117934.1|FL117934
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453377|gb|FL117938.1|FL117938
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455500|gb|FL117946.1|FL117946
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451230|gb|FL117918.1|FL117918
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453374|gb|FL117935.1|FL117935
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451222|gb|FL117910.1|FL117910
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGNATCCATCCAG                         TAGNCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|86472526|gb|DY238896.1|DY238896
EST:     CCGCCATCTCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: CCGCCATC-CATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449106|gb|FL117903.1|FL117903
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455506|gb|FL117952.1|FL117952
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449098|gb|FL117895.1|FL117895
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|6636936|gb|AW261208.1|AW261208
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455508|gb|FL117954.1|FL117954
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453370|gb|FL117931.1|FL117931
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451229|gb|FL117917.1|FL117917
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455501|gb|FL117947.1|FL117947
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455503|gb|FL117949.1|FL117949
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451236|gb|FL117924.1|FL117924
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|31355200|gb|CD439557.1|CD439557
EST:     CAACCGCCATCCATTCTCCTCCTCCGTTGCA-CTTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: CAACCGCCATCCATTCTCCTCCTCCGTTGCAGC-TGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453372|gb|FL117933.1|FL117933
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455498|gb|FL117944.1|FL117944
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449107|gb|FL117904.1|FL117904
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453375|gb|FL117936.1|FL117936
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211446982|gb|FL117890.1|FL117890
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455504|gb|FL117950.1|FL117950
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455507|gb|FL117953.1|FL117953
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTT
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTT
EST: gi|211453368|gb|FL117929.1|FL117929
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|33090955|gb|CF050949.1|CF050949
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211446986|gb|FL117894.1|FL117894
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGNCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451226|gb|FL117914.1|FL117914
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455496|gb|FL117942.1|FL117942
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|47961558|gb|CN844267.1|CN844267
EST:     TTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451224|gb|FL117912.1|FL117912
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451227|gb|FL117915.1|FL117915
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453378|gb|FL117939.1|FL117939
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455495|gb|FL117941.1|FL117941
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449102|gb|FL117899.1|FL117899
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455502|gb|FL117948.1|FL117948
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211455497|gb|FL117943.1|FL117943
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453366|gb|FL117927.1|FL117927
EST:     AACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: AACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449101|gb|FL117898.1|FL117898
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449108|gb|FL117905.1|FL117905
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGNTTCAGCGNTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211449112|gb|FL117909.1|FL117909
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211451235|gb|FL117923.1|FL117923
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211001976|gb|FL117955.1|FL117955
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGTATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453371|gb|FL117932.1|FL117932
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453369|gb|FL117930.1|FL117930
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453376|gb|FL117937.1|FL117937
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|87155572|gb|DY400361.1|DY400361
EST:     CGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: CGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
EST: gi|211453364|gb|FL117925.1|FL117925
EST:     TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAG                         TAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC
genomic: TCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatc ... tttcttgcagTAGTCCGACCAATCCATGGCTTCAGCGTTCGGGACCGCCTCCACTTGCGGC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
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CCTCTCTTAAACCCTAGCCGCTGCGCACAACAACCTGCTACTCAATTTGATCAACCGCCATCCATTCTCCTCCTCCGTTGCAGCTGCGGCATCCATCCAGgtaaaccatcgattcctcttctgctcctttgttgttgccgccggcgccggatcgatccatccgtcagtccaccggcggctgggggttctctcttgcagttgcgctgccgctcatccacggtcgcggatacattagatggatagctgagtgctgatgcaaacctccaaatttcttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCTGC