1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCCGGCCTTCTATGCCGCCTGCACTGCCGGAGGAATCGCCAGCTGCGGGCTCACCCACATGGCCGTCACGCCTCTCGACCTCGTCAAGTGCAATATGCAGgtgagcgggtagcaccctagatctgtcgcccctgtgctccacaggatccattttgggaagattcactgattctaatggaacatggccagagtcaaagtca...
species | Zea mays |
transcript | GRMZM2G015401_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CACCCACATGGCCGTCACGCCTCTCGACCCTCGTCAAGTGCAATATGCAG ATTGACCCAGCGAAATACAAGAGTATCTCATCTGGATTTGGTATCCTGTTAEST: gi|120480821|gb|EH211041.1|EH211041
genomic: CACCCACATGGCCGTCACGCCTCTCGACC-TCGTCAAGTGCAATATGCAGgtgagcgggt ... tttttttcagATTGACCCAGCGAAATACAAGAGTATCTCATCTGGATTTGGTATCCTGTTA
EST: TCACCCACATGGCCGTCACGCCTCTCGACCTCGTCAAGTGCAATATGCAG ATTGACCCAGCGAAATACAAGAGTATCTCATCTGGATTTGGTATCCTGTTA
genomic: TCACCCACATGGCCGTCACGCCTCTCGACCTCGTCAAGTGCAATATGCAGgtgagcgggt ... tttttttcagATTGACCCAGCGAAATACAAGAGTATCTCATCTGGATTTGGTATCCTGTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCGGCCTTCTATGCCGCCTGCACTGCCGGAGGAATCGCCAGCTGCGGGCTCACCCACATGGCCGTCACGCCTCTCGACCTCGTCAAGTGCAATATGCAGgtgagcgggtagcaccctagatctgtcgcccctgtgctccacaggatccattttgggaagattcactgattctaatggaacatggccagagtcaaagtca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcgcccc