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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAGGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAGgtatgcagtgctttaccttctgtagcggtcgacaattttgtttatgatacatcatgacatgatcaatgcaaaattggcag

Basic information

species Zea mays
transcript GRMZM2G013625_T03
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|91053085|gb|EB163503.1|EB163503
EST:     AGGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAG                         ATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC
genomic: AGGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAGgtatgcagtg ... aaattggcagATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC
EST: gi|78115431|gb|DV533819.1|DV533819
EST:     GGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAG                         ATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC
genomic: GGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAGgtatgcagtg ... aaattggcagATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC
EST: gi|71767635|gb|DR965572.1|DR965572
EST:     AGGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAG                         ATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC
genomic: AGGCTGAAATTTTGGTGTCCTTGCTCAGCCATGGGTAGTAGGAGgtatgcagtg ... aaattggcagATATGACATTGATACGAGGAGATGTGGGATCCACTCAAGACCAACCAAATC