1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GCGCTACTGGTTGGTTTCGTAGGGGGGTTTGGGGCGGCCGGATACGTGTACAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggactgctcgagctttgctcttcggctcgtatttagtgcttgtttgagcttctctgatgatgggataccagtgatttggacttggatcaaagcca...
species | Zea mays |
transcript | GRMZM2G011479_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACG GCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGGEST: gi|86469146|gb|DY235516.1|DY235516
genomic: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggact ... acatgggcagGCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGG
EST: AAGGACAAGATCAACACTTTCCCTCACGCAGTTCTCAGGGTTCATTGACG GCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGGEST: gi|91049969|gb|EB160387.1|EB160387
genomic: AAGGACCAGATCAACACTTT-CCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggact ... acatgggcagGCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGG
EST: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACG GCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGGEST: gi|50335652|gb|CO530778.1|CO530778
genomic: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggact ... acatgggcagGCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGG
EST: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACG GCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGGEST: gi|211348783|gb|FL410665.1|FL410665
genomic: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggact ... acatgggcagGCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGG
EST: CAAGGACCAGATCAACACCTTCCTCACGCAGTTCTCAGGGTTCATTGACG GCTATGGTCCAGCCGGATATGCTCTGGTCGTACTTGTATATGCAAGATTGG
genomic: CAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggact ... acatgggcagGCTATGGTCCAGCCGGATATGCTCTGTTCGTACTTGTATATGCAGGATTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGCTACTGGTTGGTTTCGTAGGGGGGTTTGGGGCGGCCGGATACGTGTACAAGGACCAGATCAACACTTTCCTCACGCAGTTCTCAGGGTTCATTGACGgtaatggactgctcgagctttgctcttcggctcgtatttagtgcttgtttgagcttctctgatgatgggataccagtgatttggacttggatcaaagcca
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