1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CCCAGAATTTCCCCCCTCCCCCGCACCCCCCGCAAACATCCTAGCAGCCCTATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAGgtacactccgcacgcggctccccccagttctctcagctctccccgtccaatccagtacaatccacgccgtctcgattggccgacgccgccaagtctgtgt...
species | Zea mays |
transcript | GRMZM2G006477_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAG AGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACTEST: gi|89755815|gb|DY686094.1|DY686094
genomic: TATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAGgtacactccg ... ctgtttgcagAGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACT
EST: TATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAG AGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACTEST: gi|91048801|gb|EB159219.1|EB159219
genomic: TATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAGgtacactccg ... ctgtttgcagAGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACT
EST: GCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAG AGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACT
genomic: GCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAGgtacactccg ... ctgtttgcagAGTAATGGATTAATGCATTAAGCAAGGTAATGAAATGTACCAAAAGTGACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCAGAATTTCCCCCCTCCCCCGCACCCCCCGCAAACATCCTAGCAGCCCTATCATCGCGCCGGTCCCGGCGGCCTGCCGGCCTCCTCGCACCCTCCCAGgtacactccgcacgcggctccccccagttctctcagctctccccgtccaatccagtacaatccacgccgtctcgattggccgacgccgccaagtctgtgt
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