Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGTGCCAATGAATCCGGTAACAACAGTGGTAGCAACGACGATGAAGCTGGCATGGGACTTAATGCAAGGGATGACAGTGATAATGGCAGTGGCACTCAAgtatgggttttgatacttttttttacttctctaaagcttattactggctgttatcatgttgttcaaggtatgaacgtagtaacacttagaatacaagaaa...

Basic information

species Zea mays
transcript GRMZM2G005732_T03
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G005732_T03 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os07g49460.3 (Oryza sativa), 5'ss of exon 7
AGGTGCCAATGAATCCGGTAACAACAGTGGTAGCAACGACGATGAAGCTGGCATGGGACTTAATGCAAGGGATGACAGTGATAATGGCAGTGGCACTCAAgtatgggttttgatacttttttttacttctctaaagctt-attactggctgttatcat-gttgttcaaggtatgaacgtagtaacacttagaatacaagaaa---
|      ||| |    || | |||    | |    |||||||||  |    |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||    |||||     |||||| | |   | ||||| | ||||  |||||| ||  | |||     | ||||    |  || ||| |   || ||       
ATCCAATAATAACAATGGCAGCAATGACGATGATGACGACGATGGTGTAATCATGGGACTTAATGCAAGAGATGGCAGTGATAACGGCAGTGGCACTCAAgtatgaaacttgat----ctttttattccaacatagctttactactacctgttaacaaagctgtaattagaatgagaagaaaaa-actgaagttaaaaactgaat