1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGAAGGCATGGAGGCGGAGTGGAGAAAGTGGTGGAGAGGCGGCGGCGGAGGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagccttttgctgaattcatgcatgtcttactgaccaaggcaccaagcaatttgttagtgcttcttgactcatgacattgtgaactttcgcaattc...
species | Zea mays |
transcript | GRMZM2G002075_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|211012553|gb|FL439504.1|FL439504
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|71324227|gb|DR798818.1|DR798818
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|91053368|gb|EB163786.1|EB163786
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGGCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAAAAACTCAAAGAGCAAAATEST: gi|211539439|gb|FL405547.1|FL405547
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|74235876|gb|DT643790.1|DT643790
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|60341519|gb|DN208492.1|DN208492
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAATEST: gi|78104928|gb|DV523346.1|DV523346
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
EST: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAG GCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
genomic: GGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagcct ... tactgcatagGCTTATACAATGGAGTTAGAAGCCGAAGTTCAGAAACTCAGAGAGCAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGAAGGCATGGAGGCGGAGTGGAGAAAGTGGTGGAGAGGCGGCGGCGGAGGATGATCAAGAACAGGGAGTCCGCCGCGAGGTCCCGAGCGCGCAAACAGgtcacagccttttgctgaattcatgcatgtcttactgaccaaggcaccaagcaatttgttagtgcttcttgactcatgacattgtgaactttcgcaattc
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