1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTACGACAGGCTGGTGTCTAACGACGTGTTGGACTTGGTCGGGGAGGGCTCCAGGCTTCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAGgtgtgggagcactgttccttcgtttcaatttggaagtttacacgcgattggaaatgctagttgggcgggcattctgcaataacgatttcaagtaggtact...
species | Zea mays |
transcript | GRMZM2G000739_T01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCAGGCTGCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAG GAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTTEST: gi|22489197|gb|BU049133.1|BU049133
genomic: CCAGGCTTCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAGgtgtgggagc ... tgcaatgtagGAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTT
EST: CCAGGCTGCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAG GAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTTEST: gi|18384084|gb|BM417284.1|BM417284
genomic: CCAGGCTTCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAGgtgtgggagc ... tgcaatgtagGAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTT
EST: CCAGGCTGCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAG GAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTT
genomic: CCAGGCTTCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAGgtgtgggagc ... tgcaatgtagGAGGAGATTCACGAGCTGCTGCTGAGCTTTGCGGAGGCTGGTGCCAATGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTACGACAGGCTGGTGTCTAACGACGTGTTGGACTTGGTCGGGGAGGGCTCCAGGCTTCTCTATGTCGGCAAGACCGCGGGATACCACAGCCGCACCCAGgtgtgggagcactgttccttcgtttcaatttggaagtttacacgcgattggaaatgctagttgggcgggcattctgcaataacgatttcaagtaggtact
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