1 5' 3' | 2 5' 3' | 3 5' 3' |
ATCCAAAAATCATATAATGTTCCTAGACTGATTGATGGTTTTCCAAATTGTAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttgtagttttgtacttgttgacaatcatctcttcagtctaccataatccctcttccatttgatgtgacag
species | Zea mays |
transcript | AC210529.3_FGT004 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACG AATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATGEST: gi|60401085|gb|DN233892.1|DN233892
genomic: TAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttg ... gatgtgacagAATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATG
EST: TAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACG AATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATGEST: gi|71759020|gb|DR956957.1|DR956957
genomic: TAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttg ... gatgtgacagAATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATG
EST: ATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACG AATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATGEST: gi|149111058|gb|EE294555.2|EE294555
genomic: ATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttg ... gatgtgacagAATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATG
EST: GATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACG AATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATG
genomic: GATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttg ... gatgtgacagAATCTGGTCATCTGTATGTCTGGGGAAGAGCATTAATTGGACAACATGATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCCAAAAATCATATAATGTTCCTAGACTGATTGATGGTTTTCCAAATTGTAAGATAGTAAATATATATGCCAATGGCGATCACAGTGCTGCATTGGACGgtaagctttgtagttttgtacttgttgacaatcatctcttcagtctaccataatccctcttccatttgatgtgacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC