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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTCCCACCCACTCTATCCGGCTGTCTTGAGAGCCTTCATAGACTGCCAGAAGgtatgcgtgcagcagatttccgagagacatacaattctgcagctaattttgccagagagcgaaagcatggcttcttgatttttttaatgtgctagctccgtccttatatattattctccaatttttcatgaggaatttctcttttgtgtgttttttgttacttgag

Basic information

species Zea mays
transcript AC206246.3_FGT003
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AC206246.3_FGT003 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g47022.1 (Oryza sativa), 5'ss of exon 1
----------------------------------------------ATGTCCCACCCACTCTATCCGGCTGTCTTGAGAGCCTTCATAGACTGCCAGAAGgta---tgcgtgcagcagatttccgagagacatacaattctgcagctaattttgccagagagcgaaagcatggc--ttcttgatttttttaatgtgctagctccgtccttatatattattctccaattttt-catgaggaatttctcttttgtgtgttttttgttacttgag
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ACAATCTTTCCATGAGAGGGAAACGGATGCAATCAAAGCCAAGATCATGTCGCACCCCCTCTACCCGGCTCTCCTCAGAGCCTTCATAGATTGCCAGAAGgtaaactatatatactgaattcctcacatcc---taagcacacacatgcatgtgattaatat--aattcatggcaattgttgcctctctt--tcaaattcttttttcttcccatcttctttttgaatttatgtgtgtgtggaactggttttg---attttgtgaaacctaag