1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
ACTGGAAGTTTGGAGAGGAGGGGAACAAGTATTTCCGGCATGCAACTGGGCAGATTTATGCAATCTCAAAAGATCTGGCCACATACATCTCGATCAACCAgtaagaattgagttttttttatatggaattagcctgtttggccattttctgagctaccatatcaaaaggtcttgcaattcatcccctgggcatgattttc...
species | Vitis vinifera |
transcript | Vv18s0001g04150.t01 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: AGATTTATGCAATCTCAAAGGATCTGGCCACATACATCTCAATCAACCA GCCCATATTGCACAAATATGCCAATGAAGATGTGTCTCTTGGTTCGTGGTTEST: gi|111125070|gb|EE253689.1|EE253689
genomic: AGATTTATGCAATCTCAAAAGATCTGGCCACATACATCTCGATCAACCAgtaagaattg ... gtgaatgcagGCCCATATTGCACAAATATGCCAATGAAGATGTGTCTCTTGGTTCGTGGTT
EST: CAGATTTATGCAATCTCAAAAGATCTGGCCACATACATCTCGATCAACCA GCCCATATTGCACAAATATGCCAATGAAGATGTGTCTCTTGGTTCGTGGTT
genomic: CAGATTTATGCAATCTCAAAAGATCTGGCCACATACATCTCGATCAACCAgtaagaattg ... gtgaatgcagGCCCATATTGCACAAATATGCCAATGAAGATGTGTCTCTTGGTTCGTGGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGGAAGTTTGGAGAGGAGGGGAACAAGTATTTCCGGCATGCAACTGGGCAGATTTATGCAATCTCAAAAGATCTGGCCACATACATCTCGATCAACCAgtaagaattgagttttttttatatggaattagcctgtttggccattttctgagctaccatatcaaaaggtcttgcaattcatcccctgggcatgattttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaggt