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GAATTATCATCAGATTCTTCCCAGCATGTTCGTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAGgtaagggtaccatattagtatgtatataattattcaggttggaggtagttgaaccatttatttactttctagtgtggtttcatacttgcaggcaaagctg...
species | Vitis vinifera |
transcript | Vv17s0000g03870.t01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAG GACGCAACAATAGATCAACTTCTGCCCATTTTCCTTTCTCTGCTTAAAGATEST: gi|30302057|gb|CB978851.1|CB978851
genomic: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAGgtaagggtac ... attcctatagGACGCAACAATAGATCAACTTCTGCCCATTTTCCTTTCTCTGCTTAAAGAT
EST: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAG GACGCAACAATAGATCAACTTCTGCCCAGANTCCTTTCTCTGCTTAAAGATEST: gi|71866595|gb|DT015650.1|DT015650
genomic: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAGgtaagggtac ... attcctatagGACGCAACAATAGATCAACTTCTGCCCATTTTCCTTTCTCTGCTTAAAGAT
EST: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAG GACGCAACAATAGATCAACTTCTGCCCATTTTCCTTTCTCTGCTTAAAGAT
genomic: GTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAGgtaagggtac ... attcctatagGACGCAACAATAGATCAACTTCTGCCCATTTTCCTTTCTCTGCTTAAAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATTATCATCAGATTCTTCCCAGCATGTTCGTTCTGCTTTGGCTTCAGTTATTATGGGAATGGCACCTGTTTTAGGAAAGgtaagggtaccatattagtatgtatataattattcaggttggaggtagttgaaccatttatttactttctagtgtggtttcatacttgcaggcaaagctg
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