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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGCAACTCCTGCTCAACAATCACTCGGTTCCCACGCTACAATGATCCATTAAAGgtattgaagtttcattatctgattaagaagtttttatttcatatacttccccatatccttttctgtgcag

Basic information

species Vitis vinifera
transcript Vv14s0030g01930.t01
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|294965100|gb|GW836931.1|GW836931
EST:     ACTCCTGCTCAACAATCACTCGGTTCCCACGCTACAATGATCCATTAAAG                         CTTGTGGAAACAAGAAAGGGGCGCTGTGGGGAGTGGGCAAATTGCTTTACA
genomic: ACTCCTGCTCAACAATCACTCGGTTCCCACGCTACAATGATCCATTAAAGgtattgaagt ... ttctgtgcagCTTGTGGAAACAAGAAAGGGGCGCTGTGGGGAGTGGGCAAATTGCTTTACA
EST: gi|352765233|gb|FQ465930.1|FQ465930
EST:     ACTCCTGCTCAACAATCACTCGGTTCCCACGCTACAATGATCCATTAAAG                         CTTGTGGAAACAAGAAAGGGGCGCTGTGGGGAGTGGGCAAATTGCTTTACA
genomic: ACTCCTGCTCAACAATCACTCGGTTCCCACGCTACAATGATCCATTAAAGgtattgaagt ... ttctgtgcagCTTGTGGAAACAAGAAAGGGGCGCTGTGGGGAGTGGGCAAATTGCTTTACA