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TTACCTGCCTTGTTGCAAAACGAATTGGAAATAGACTTGCAGACAACCACTGGGAACTTCGAGACTTCACAGCAAACCTGGTTGCTTCAATATGCAAAAGgtggggcatactaaagttattttgtgcttataagggaattgataaccctagttttaggaaatggagataaaatatttactcaaccttccattgacagact...
species | Vitis vinifera |
transcript | Vv12s0059g00300.t01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGGGAACTTCGAGACTTCACAGCAAACCTGGTTGCTTCAATATGCAAAAG ATTTGGGCATGTTTATAACAATCTGCAAACGCGGCTGACAAAGACTCTGCTEST: gi|122692206|gb|EC995506.1|EC995506
genomic: TGGGAACTTCGAGACTTCACAGCAAACCTGGTTGCTTCAATATGCAAAAGgtggggcata ... gattttgcagATTTGGGCATGTTTATAACAATCTGCAAACGCGGCTGACAAAGACTCTGCT
EST: AATATGCAAAAG ATTTGGGCATGTTTATAACAATCTGCAAACGCGGCTGACAAAGACTCTGCT
genomic: AATATGCAAAAGgtggggcata ... gattttgcagATTTGGGCATGTTTATAACAATCTGCAAACGCGGCTGACAAAGACTCTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTACCTGCCTTGTTGCAAAACGAATTGGAAATAGACTTGCAGACAACCACTGGGAACTTCGAGACTTCACAGCAAACCTGGTTGCTTCAATATGCAAAAGgtggggcatactaaagttattttgtgcttataagggaattgataaccctagttttaggaaatggagataaaatatttactcaaccttccattgacagact
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