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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAACTTAGTTGCTTGAGTTGGAATAAGTACACAAAGAACCATATAGCTAGCAGTGATTATGAAGGGATAGTAACTGTTTGGGATGTAACTACTCGTCAGgtagaaattgtatctcttctcttctgttaatctcaattacatcatatatgcacaaatgttgatctgcattcacaattttctaacctcccaatgatttcgagtttgttcactaagattctttttcttctag

Basic information

species Vitis vinifera
transcript Vv10s0523g00030.t01
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv10s0523g00030.t01 (Vitis vinifera), 5'ss of exon 8
lower sequence: LOC_Os02g53140.1 (Oryza sativa), 5'ss of exon 8
AAAACTTAGTTGCTTGAGTTGGAATAAGTACACAAAGAACCATATAGCTAGCAGTGATTATGAAGGGATAGTAACTGTTTGGGATGTAACTACTCGTCAGgtagaaattgtatctcttctcttctgttaatctcaattacatcatatatgcacaaatgttgatctgcattcacaattttctaacctcccaatgatttcgagtttgttcactaagattctttttcttctag
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TAAACTCAGCTGCCTTAGCTGGAACAAGTACTCAAAAAATGTTATAGCAAGCAGCGACTATGAGGGTATAGTAACTGTTTGGGATGTCCAAACCCGCCAGgtatttcttg---ctctgttccacagttcattt----tgca-cacttgtgttattttctgaacttggattcatgatatt-tatgtattcaatcttctttag-----------------------------