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CATGCTGCAATTCGTGAAGACATCAGCATCAATCTTGGCCCTCTTGAGGAGCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgttagtggacacatttcctcacttttcatttttataaatgatttctcatgttaagtggttatcattggcatcaaactggtaacaactggtaat...
species | Vitis vinifera |
transcript | Vv10s0003g03120.t01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|30297699|gb|CB974493.1|CB974493
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|110377199|gb|EC942256.1|EC942256
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|110370143|gb|EC934323.1|EC934323
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|30297767|gb|CB974561.1|CB974561
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|110389282|gb|EC954107.1|EC954107
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|110695590|gb|EE073783.1|EE073783
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: CTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|30297878|gb|CB974672.1|CB974672
genomic: CTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|34320115|gb|CF372869.1|CF372869
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGNCAATTTCAGCAGGGAATTGNCCGACTATATTATTTATAEST: gi|34363050|gb|CF404635.1|CF404635
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|22014004|gb|BQ799038.1|BQ799038
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|22012463|gb|BQ797497.1|BQ797497
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|110703836|gb|EE081029.1|EE081029
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATAEST: gi|22015218|gb|BQ800252.1|BQ800252
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
EST: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAG ATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
genomic: GCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgtt ... gtcactgcagATAATTTAGCTGCCAATTTCAGCAGGGAATTGGCCGACTATATTATTTATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGCTGCAATTCGTGAAGACATCAGCATCAATCTTGGCCCTCTTGAGGAGCTTTCCAACTTGTTCAAAGTTGACATACTTCTCTGTGAATCTGGGGGAGgtaatttgttagtggacacatttcctcacttttcatttttataaatgatttctcatgttaagtggttatcattggcatcaaactggtaacaactggtaat
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