1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAATACAAATGGCTACAGCCTTGCGGTGGATATTTGGAGCTTAGGATGTACAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgtggatatttgggccatattttatagtagttatttttgttaaggtcaggtgtgaaatgttcgtagaccaaaccattttatcatgttgaatgtgacag
species | Vitis vinifera |
transcript | Vv04s0044g01290.t01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGG GTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCCEST: gi|26257410|gb|CA808473.1|CA808473
genomic: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgt ... aatgtgacagGTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
EST: AATCTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGG GTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCCEST: gi|26257306|gb|CA808369.1|CA808369
genomic: AAT-TCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgt ... aatgtgacagGTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
EST: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGG GTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCCEST: gi|161719911|gb|FC068682.1|FC068682
genomic: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgt ... aatgtgacagGTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
EST: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGG GTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCCEST: gi|27583422|gb|CB006117.1|CB006117
genomic: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgt ... aatgtgacagGTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
EST: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGG GTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
genomic: CAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgt ... aatgtgacagGTGGCTGCAATTTTTAAAATTGGAAACAGCAGGGATGTCCCTGAAATTCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAATACAAATGGCTACAGCCTTGCGGTGGATATTTGGAGCTTAGGATGTACAATTCTTGAAATGGCAACATCAAAACCACCTTGGAGTCAATATGAAGGGgtgagattgtggatatttgggccatattttatagtagttatttttgttaaggtcaggtgtgaaatgttcgtagaccaaaccattttatcatgttgaatgtgacag
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