1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TTGAAGCGGGATGTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcattgtttgccttcatgggatggttttgaatgttcagttgctcttcaacaattgttgatttgtgcttaaacatacattagttctttacatcatg...
species | Vitis vinifera |
transcript | Vv04s0008g00760.t01 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: GTTGTTGCAACAATCATGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAAGCTGAGAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACNEST: gi|110700486|gb|EE078578.1|EE078578
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGAGAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACAEST: gi|51050666|gb|CO818666.1|CO818666
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGAGAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACCEST: gi|349826052|gb|FQ415857.1|FQ415857
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGAGAGCGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACAEST: gi|349830056|gb|FQ420316.1|FQ420316
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGAGAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACAEST: gi|110362125|gb|EC925639.1|EC925639
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGAGAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACCEST: gi|110394078|gb|EC958525.1|EC958525
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACAEST: gi|110372710|gb|EC936897.1|EC936897
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
EST: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAA GACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
genomic: GTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcatt ... atgtgtgcagGACAAAGGCTGACAGTGGAGCTGGCTTCTCCCATGTGGAATGAAGAACACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGAAGCGGGATGTTGTTGCAACAATCGTGTATGAAATTACTCCAAATCCTTCTGATCACAAgtaagtcattgtttgccttcatgggatggttttgaatgttcagttgctcttcaacaattgttgatttgtgcttaaacatacattagttctttacatcatg
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