1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTGTGTTTACCTTCTGTGGGTTCCTAACTCCTTGCCAATGCTCTATTACACTATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTATTCCCAGAGgtacctcactcttttttcctttaccaactcttgtcatatctcacatctcacatgggacagggatagagaaaaagttcctaatacaatatacacttgaact...
species | Vitis vinifera |
transcript | Vv19s0015g00730.t01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTAGAT-CCAGAG GTGTCAAGCCTATGGTTCCTGCCATTTGCGTATGTTTTTACAGCCAAGTAEST: gi|33402030|gb|CF207657.1|CF207657
genomic: TATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTA-TTCCCAGAGgtacctcact ... gttgtcttagGTGTCAAGCCTATGGTTCCTGCCATTTGCGTATGTTTTTACAGCCAAGTA
EST: CTATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTATTCCCAGAG GTGTCAAGCCTATGGTTCCTGCCATTTGCGTATGTTTTTACAGCCAAGTAC
genomic: CTATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTATTCCCAGAGgtacctcact ... gttgtcttagGTGTCAAGCCTATGGTTCCTGCCATTTGCGTATGTTTTTACAGCCAAGTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTGTTTACCTTCTGTGGGTTCCTAACTCCTTGCCAATGCTCTATTACACTATTGTTCCTCCCCTGTTCTTGCTTCGTGGCGTTGCCTTATTCCCAGAGgtacctcactcttttttcctttaccaactcttgtcatatctcacatctcacatgggacagggatagagaaaaagttcctaatacaatatacacttgaact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agggata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - agaaaaa