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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAAAACAATCTCTTTAAGTCTCGGGAAGAGAAATACCAGTCGAGAATCAGAGTACTTGAAACCCTTGCAACTGGGACTAATGATGAAAACCAGgtacttcaaatatgttgtattgaaagattctaaattgtcaggtttgcctttttgtttatttggtacaactactggattcaccaaatgaaattatttgctgcag

Basic information

species Vitis vinifera
transcript Vv17s0000g03700.t01
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv17s0000g03700.t01 (Vitis vinifera), 5'ss of exon 7
lower sequence: GLYMA05G35130.1 (Glycine max), 5'ss of exon 6
CAAAACAATCTCTTTAAGTCTCGGGAAGAGAAATACCAGTCGAGAATCAGAGTACTTGAAACCCTTGCAACTGGGACTAATGATGAAAACCAGgtacttcaaatatgttgtattgaaagattctaaattgtcaggtttgcctttttgtttatttggtacaactactggattcaccaaatgaaat---tatttgctgcag-
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CAAAACAATCTTTTCAAGGCTCGGGAAGAAAAATACCAATCGAGAATAAGAGTACTTGAGGCACTTGCATCTGGAACTAGAGATGAGAGTGAGgtatcacaaata-gttttgtctagttatt-----ttgctagaattataccaattttatataccttcaaattttgcatat-tggtatgagatttctatttatcagagg