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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAAGGAACAGGAATTGGATCACAAGAGAAGCAGCAAACTGAAAAAGTTTTGAATAGGCTAATCTCCAAGAATTCCCATGAGATACTCAATGTTGACAAGgtaagaatgagccattctatatcctttctttccctttcttccctctcaaagattaaagtttgcattagcttttgccaatgaataatatattttttctttttttctttttaaattcaacaaatataatttttgctaatcacttgaattaaattgtttggaaactag

Basic information

species Vitis vinifera
transcript Vv15s0046g01120.t01
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv15s0046g01120.t01 (Vitis vinifera), 5'ss of exon 7
lower sequence: GLYMA13G23700.1 (Glycine max), 5'ss of exon 7
GGAAGGAACAGGAATTGGATCACAAGAGAAGCAGCAAACTGAAAAAGTTTTGAATAGGCTAATCTCCAAGAATTCCCATGAGATACTCAATGTTGACAAGgtaa--gaatgagccattctatatcctttctttccctttcttccctctcaaagattaaagtttgcattagcttttgccaatgaataatatattttttctttttttctttttaaattcaacaaatataatttttgctaatcacttgaattaaattgtttggaaactag
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GGAAGGAACCGGGATAGGATCCCTGGAGAGGGAGCAAACTGAAAAAATATTGAACAAGATCATCTCCAAGAATTCTCATAACATACTCAACGTTGAAAAGgtacttgcattaga-gtcctatagtagtaatgacttggatttc----tcaaatatactagtttttattaactttttttttttgtcaaaattgatctctgtattctag------------------------------------------------------------