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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTTGGGTGAACTTCTATGGAAACATAGGAAAGCTCTTGATATCTCTGgtacggaatgttcattgcatgccttccttctttactgtgactgctactcattaatctctttcataggatatatattgacttagctctggaatttcttgtgaaaatgtaaatggcatacaattgcag

Basic information

species Vitis vinifera
transcript Vv14s0219g00130.t01
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv14s0219g00130.t01 (Vitis vinifera), 5'ss of exon 7
lower sequence: GLYMA19G23610.1 (Glycine max), 5'ss of exon 7
GTTCTTGGGTGAACTTCTATGGAAACATAGGAAAGCTCTTGATATCTCTGgtacggaatgttc----attgcatg----------ccttccttctttactgtgactgctactcattaatctctttcataggatatatattgacttagctctggaatttcttgtgaaaatgtaaatggcatacaattgcag
 ||| ||||||||||||||||||||||||||||| || ||| |||| |||||| ||    |||    | || |||             |   | | | |    | |  ||||| |||   | ||        |  ||| |   |   ||     |    |  |    | | ||    ||   ||||| ||
ATTCATGGGTGAACTTCTATGGAAACATAGGAAAACTATTGCTATCCCTGgtatgggtcattcttttactgtatgaaaatacaattgatttctttctgcaagaaattttactcgttacattgttattctaattcaatagtttttctactaatacaacattgttattgacggaataaacaattaattgtag