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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCATAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatgatgcactaatgtgttcctttccttataatcgattaagttttaggtgaaacgttgagaaagactgattgtatggcttgaccttttgttag

Basic information

species Vitis vinifera
transcript Vv14s0060g02160.t01
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|34544987|gb|CF513219.1|CF513219
EST:     TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAAT                         TCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
genomic: TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatga ... cttttgttagTCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
EST: gi|110375703|gb|EC940714.1|EC940714
EST:     TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAAT                         TCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
genomic: TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatga ... cttttgttagTCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
EST: gi|110385484|gb|EC950016.1|EC950016
EST:     TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAAT                         TCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
genomic: TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatga ... cttttgttagTCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
EST: gi|110383404|gb|EC947776.1|EC947776
EST:     TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAAT                         TCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
genomic: TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatga ... cttttgttagTCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
EST: gi|34545979|gb|CF514211.1|CF514211
EST:     TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAAT                         TCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT
genomic: TAACAAACAGGGACACACTTGTGAAACTCCTGGCTAAGCACACTGGAAATgtgagtatga ... cttttgttagTCGGAAGAGACTGTATCTACTGTGATGAGAAGACCATATTATATGGATTCT