1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAGgttagttaggtgcttctgaatttcaatgaatattgccattattgtgctgcagcttgattccataccatgatgttaagttgttaactatgtgcaactttgt...
species | Vitis vinifera |
transcript | Vv06s0061g01520.t01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAG CTCACTGTGGCTTGCATAAAGATGAACAGACCCGAAATTGCTGAAAAAGCTEST: gi|110720365|gb|EE096223.1|EE096223
genomic: TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAGgttagttagg ... cttgtttcagCTCACTGTGGCTTGCATAAAGATGAACAGACCCGAAATTGCTGAAAAAGCT
EST: TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAG CTCACTGTGGCTTGCATAAAGATGAACAGACCTGAAATTGCTGAAAAAGCT
genomic: TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAGgttagttagg ... cttgtttcagCTCACTGTGGCTTGCATAAAGATGAACAGACCCGAAATTGCTGAAAAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTTGGTCATACCATAATGGAGGCTCGTGGCCAACTTTGCTCTGGCAGgttagttaggtgcttctgaatttcaatgaatattgccattattgtgctgcagcttgattccataccatgatgttaagttgttaactatgtgcaactttgt
- - - - - - - - - TGGAGG