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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGTGCTTGCTGCATTCTTTGTACTAAAATGGCGAAAACCACAATTAAAGACAATATACGACCTAGAGAAGGGACGCTATATTGTTACCCATGTACCCAGgtaattttttttccatcatcactggccttttttcttttttctgttgctttccttttgtgtttttgtttttaaatctttgtttctcttctcatttataaac...

Basic information

species Vitis vinifera
transcript Vv06s0009g01720.t01
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv06s0009g01720.t01 (Vitis vinifera), 5'ss of exon 7
lower sequence: GLYMA02G25530.1 (Glycine max), 5'ss of exon 7
CTGTGCTTGCTGCATTCTTTGTACTAAAATGGCGAAAACCACAATTAAAGACAATATACGACCTAGAGAAGGGACGCTATATTGTTACCCATGTACCCAGgtaattttttttccatcatcactggccttttttcttttttctgttgctttccttttgtgtttttgtttttaaatctttgtttctcttctcatttataaac--
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TCATGCTTGCTGCATTCTTTGTACTGCAATGGAGAAAGCCACAATTGAAGACAGTATATGACCTTGAGAAGGGACGCTATATTGTTACACGTATACCCAGgtgacactgttacc-tcttc-ctagaatttgttagattcgattttcttcatttgtgaagcacatgcaagttgatgttcttttcatgttcatcctaaacatct