1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ACTAAAATGGAGATGTTGGCTGAAAAGCACAGATGCACCCCTGCACAGCTTGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTGgtgagtcacgtgttcttcctctcaacctagcatgcaaagaacatgcttaacatctgttcttgtcctcacaataacatcattcatatctcttttgattgtc...
species | Vitis vinifera |
transcript | Vv14s0030g01980.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTG GGACCACTAAGATCAAAAATCTTGATGATAATATCAGTTCCTTGAGATTGAEST: gi|351025651|gb|FQ426665.1|FQ426665
genomic: TGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTGgtgagtcacg ... ttacatgtagGGACCACTAAGATCAAAAATCTTGATGATAATATCAGTTCCTTGAGATTGA
EST: TGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTG GGACCACTAAGATCAAAAATCTTGATGATAATATCAGTTCCTTGAGATTGA
genomic: TGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTGgtgagtcacg ... ttacatgtagGGACCACTAAGATCAAAAATCTTGATGATAATATCAGTTCCTTGAGATTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTAAAATGGAGATGTTGGCTGAAAAGCACAGATGCACCCCTGCACAGCTTGCACTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGCACCTATCCCTGgtgagtcacgtgttcttcctctcaacctagcatgcaaagaacatgcttaacatctgttcttgtcctcacaataacatcattcatatctcttttgattgtc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cttcctc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aataaca