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TTTGTGATCCTGTGATGGGTGATGACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatccaatcatgggatattgtgtgtgtaagcttgttctatgttcacatgtatacaagtgagatacaaaatttgaattatttcactctagtgttt...
species | Vitis vinifera |
transcript | Vv14s0006g01660.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAG GTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAGGCAGAACTAEST: gi|110715098|gb|EE092763.1|EE092763
genomic: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatc ... ttatggttagGTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAAGCAGAACTA
EST: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAG GTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAAGCAGAACTAEST: gi|18458843|gb|BM437121.1|BM437121
genomic: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatc ... ttatggttagGTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAAGCAGAACTA
EST: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAG GTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAGGCAGAACTAEST: gi|71859789|gb|DT008844.1|DT008844
genomic: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatc ... ttatggttagGTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAAGCAGAACTA
EST: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAG GTTGTTCCAGTTGCTTCAATGTTGACTEST: gi|161712131|gb|FC061503.1|FC061503
genomic: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatc ... ttatggttagGTTGTTCCAGTTGCTTCAATGTTGACT
EST: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAG GTTGGTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAGGCAGAACTA
genomic: ACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatc ... ttatggttagGTTGTTCCAGTTGCTTCAATGTTGACTCCTAATCAGTTTGAAGCAGAACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTGTGATCCTGTGATGGGTGATGACGGAAAGCTCTATGTCCCAACAGAGTTAGTGGCAATCTACCGTGAGAAGgtgagcaatccaatcatgggatattgtgtgtgtaagcttgttctatgttcacatgtatacaagtgagatacaaaatttgaattatttcactctagtgttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gatacaa