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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATCTGGATCCAGTTATCTGTATGGTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattctaaaatttatacatttggaagtacttgtagctgcttcctagttgtctgatctgtatgcaaagtttgttaagactagatctcattatcaaca...

Basic information

species Vitis vinifera
transcript Vv11s0065g00320.t01
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351043926|gb|FQ431357.1|FQ431357
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351031738|gb|FQ459995.1|FQ459995
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351021488|gb|FQ446032.1|FQ446032
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110731755|gb|EE106442.1|EE106442
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|352794354|gb|FQ481585.1|FQ481585
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110385861|gb|EC950417.1|EC950417
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349822011|gb|FQ408340.1|FQ408340
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351026847|gb|FQ436500.1|FQ436500
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351025243|gb|FQ433660.1|FQ433660
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351045391|gb|FQ447656.1|FQ447656
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351041115|gb|FQ444092.1|FQ444092
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351022613|gb|FQ447135.1|FQ447135
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351040449|gb|FQ434582.1|FQ434582
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTGTTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349809487|gb|FQ414377.1|FQ414377
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGGAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349824245|gb|FQ417632.1|FQ417632
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|30304313|gb|CB981107.1|CB981107
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTCCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351016593|gb|FQ424020.1|FQ424020
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110689479|gb|EE065738.1|EE065738
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|352786908|gb|FQ481283.1|FQ481283
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351043726|gb|FQ431079.1|FQ431079
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351025600|gb|FQ426614.1|FQ426614
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351025823|gb|FQ427835.1|FQ427835
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351038974|gb|FQ457649.1|FQ457649
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351018428|gb|FQ439240.1|FQ439240
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351036694|gb|FQ457407.1|FQ457407
EST:     GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351031403|gb|FQ445428.1|FQ445428
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAANGATGAGGCTGAA                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCAAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351029736|gb|FQ427576.1|FQ427576
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351032941|gb|FQ461830.1|FQ461830
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349829562|gb|FQ420094.1|FQ420094
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351051948|gb|FQ450639.1|FQ450639
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351024691|gb|FQ433106.1|FQ433106
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351017168|gb|FQ424595.1|FQ424595
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351017430|gb|FQ435783.1|FQ435783
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351017804|gb|FQ436157.1|FQ436157
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349827569|gb|FQ422437.1|FQ422437
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|156725857|gb|EV229968.1|EV229968
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCCCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351037015|gb|FQ460725.1|FQ460725
EST:     GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110699436|gb|EE076435.1|EE076435
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|352786494|gb|FQ479103.1|FQ479103
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGAATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|28968773|gb|CB347806.1|CB347806
EST:     GACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349824515|gb|FQ413182.1|FQ413182
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351053908|gb|FQ441674.1|FQ441674
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349825823|gb|FQ423118.1|FQ423118
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|352790114|gb|FQ481313.1|FQ481313
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351055242|gb|FQ440581.1|FQ440581
EST:     GTTTCTTTGGTCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349809005|gb|FQ407454.1|FQ407454
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCCGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349813553|gb|FQ413787.1|FQ413787
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110697799|gb|EE075191.1|EE075191
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351024243|gb|FQ423666.1|FQ423666
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349814982|gb|FQ410205.1|FQ410205
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGCGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|161715904|gb|FC065505.1|FC065505
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351031621|gb|FQ459878.1|FQ459878
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|30304254|gb|CB981048.1|CB981048
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAGGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGGTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351013648|gb|FQ429789.1|FQ429789
EST:     GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|71888991|gb|DT038046.1|DT038046
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTG
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTG
EST: gi|351021529|gb|FQ446073.1|FQ446073
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|161719520|gb|FC066431.1|FC066431
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|110382788|gb|EC947109.1|EC947109
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349812407|gb|FQ406428.1|FQ406428
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGCGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349810332|gb|FQ401778.1|FQ401778
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|351043642|gb|FQ451573.1|FQ451573
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349830158|gb|FQ420418.1|FQ420418
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|34544506|gb|CF512738.1|CF512738
EST:     GTTCCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|349824484|gb|FQ413151.1|FQ413151
EST:     GTTTCTTTGATCAAGAATGGGAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTACTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
EST: gi|71874115|gb|DT023170.1|DT023170
EST:     GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAG                         AAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT
genomic: GTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattct ... cctaatgcagAAATTGGTAGTGAAGGCTGTTTCTCTTGCTATTGCTCGAGATGGTGCAAGT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GATCTGGATCCAGTTATCTGTATGGTTTCTTTGATCAAGAATGGAAGGAAGGGATGACGAAAGATGAGGCTGAGgtattattctaaaatttatacatttggaagtacttgtagctgcttcctagttgtctgatctgtatgcaaagtttgttaagactagatctcattatcaaca

- - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG