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ATATTCACAAAATGGCGTTCCACCAAATATTGCTCCTTgtatccttgaatcttctactatcatcagtctctatatagttctgtatgcaattctgggaatctaaaagaatttttttgggtgattacgtcactggttata...
species | Vitis vinifera |
transcript | Vv07s0130g00170.t01 |
intron # | 6 |
splice site | 5' |
intron type | U12 (go to U12 genes for details) |
EST: ATATTCACAAAATGGCGTTCCANCAAATATTGCTCCTT ACTTGAATGTGGAGCCTAGTACAAGGAEST: gi|110712610|gb|EE087807.1|EE087807
genomic: ATATTCACAAAATGGCGTTCCACCAAATATTGCTCCTTgtatccttga ... aagatcacagACTTGAATGTGGAGCCTAGTACAAGGA
EST: ATATTCACAAAATGGCGTTCCACCAAATATTGCTCCTT ACTTGAATGTGGAGCCTAGTACAAGGAATTACTATCCTACCGTTTTCTTCAEST: gi|110701816|gb|EE079820.1|EE079820
genomic: ATATTCACAAAATGGCGTTCCACCAAATATTGCTCCTTgtatccttga ... aagatcacagACTTGAATGTGGAGCCTAGTACAAGGAATTACTATCCTACCGTTTTCTTCA
EST: AAATGGCGTTCCACCAAATATTGCTCCTT ACTTGAATGTGGAGCCTAGTACAAGGAATTACTATCCTACCGTTTTCTTCA
genomic: AAATGGCGTTCCACCAAATATTGCTCCTTgtatccttga ... aagatcacagACTTGAATGTGGAGCCTAGTACAAGGAATTACTATCCTACCGTTTTCTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATATTCACAAAATGGCGTTCCACCAAATATTGCTCCTTgtatccttgaatcttctactatcatcagtctctatatagttctgtatgcaattctgggaatctaaaagaatttttttgggtgattacgtcactggttata
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