1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CTGTAAATTTGGATCATCTTGCAGGTATCATCACCCTCGGGAGTGGGTTGTCCCAAAAACAAATTGTGTCCTCAGCCCCTTGGGTTTACCTCTACGTCCGgtatgcttattcactcattttgttactttattttataatttggcttcaattttgatttttcttagtccaaaactgctcaaaaagtacaaatatgctcctg...
species | Vitis vinifera |
transcript | Vv07s0104g01460.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGGEST: gi|110427499|gb|EC993939.1|EC993939
genomic: GGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
EST: TCCCAAAAACAAATTGTGTCCTCAGCCCCTTGGGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGGEST: gi|71882659|gb|DT031714.1|DT031714
genomic: TCCCAAAAACAAATTGTGTCCTCAGCCCCTTGGGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
EST: GGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGGEST: gi|71886062|gb|DT035117.1|DT035117
genomic: GGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
EST: GGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGGEST: gi|71886005|gb|DT035060.1|DT035060
genomic: GGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
EST: GGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGGEST: gi|71881269|gb|DT030324.1|DT030324
genomic: GGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
EST: GGTTTACCTCTACGTCCG GGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
genomic: GGTTTACCTCTACGTCCGgtatgcttat ... taatgaacagGGGGTGCAACCTTGCACTTTCTATCTGCAAAATGGGTACTGCAAGTTTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGTAAATTTGGATCATCTTGCAGGTATCATCACCCTCGGGAGTGGGTTGTCCCAAAAACAAATTGTGTCCTCAGCCCCTTGGGTTTACCTCTACGTCCGgtatgcttattcactcattttgttactttattttataatttggcttcaattttgatttttcttagtccaaaactgctcaaaaagtacaaatatgctcctg
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