1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGTTGGTCTTGCCTCTCAATGTTTGCAATATGAACCTAGAGAGCGGCCTAATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacctgtgcttgtctttgactatttgcatttgtaaatcctcaatctatgcttccttgttttatccttgtgctcaattaattataaaaatatttc...
species | Vitis vinifera |
transcript | Vv03s0038g03270.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|110368581|gb|EC932568.1|EC932568
genomic: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: AAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|30325969|gb|CD009231.1|CD009231
genomic: AAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|22014191|gb|BQ799225.1|BQ799225
genomic: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: CAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|33405090|gb|CF210717.1|CF210717
genomic: CAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|30328105|gb|CD011367.1|CD011367
genomic: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCAEST: gi|30136281|gb|CB921619.1|CB921619
genomic: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
EST: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGAT GTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
genomic: ATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacc ... ggtgttacagGTTCCATCTTACGTCATGCTTGGGATTCCAAAGCATGAGGATGCCCCACCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGGTCTTGCCTCTCAATGTTTGCAATATGAACCTAGAGAGCGGCCTAATACAAAGGACCTTGTTGCAACACTTGCCCCACTGAAAACCAAACCTGATgtaaggaacctgtgcttgtctttgactatttgcatttgtaaatcctcaatctatgcttccttgttttatccttgtgctcaattaattataaaaatatttc
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