1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
TATTCAGCAGTATTGTTCTCTTTGTGGGAAATACCATGTATGCACTGGCTTATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatgctgctttttttttctctcctcttgtgacatgatgttattacttccatgagcacatcttcggagtttggttctgttgtcaaactttttatt...
species | Vitis vinifera |
transcript | Vv02s0025g04540.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGG ATTTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACEST: gi|32271598|gb|CD720757.1|CD720757
genomic: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatg ... aatattgcagATT-GGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTAC
EST: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGG ATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACCEST: gi|30326530|gb|CD009792.1|CD009792
genomic: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatg ... aatattgcagATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACC
EST: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGG ATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACCEST: gi|33405577|gb|CF211204.1|CF211204
genomic: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatg ... aatattgcagATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACC
EST: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGG ATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACC
genomic: TATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatg ... aatattgcagATTGGGCTCTGCTAGAGCTGTTAATCGACGGTATATCAGTGATTGTGTACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTCAGCAGTATTGTTCTCTTTGTGGGAAATACCATGTATGCACTGGCTTATGACCTTGATTCAATAGTGGTTCTCCTACTTGGTCGTCTTTTCTGTGGgtaagtaatgctgctttttttttctctcctcttgtgacatgatgttattacttccatgagcacatcttcggagtttggttctgttgtcaaactttttatt
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