Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatcaattctctatcaaaatcaaaaacaaaacctttacatctgattcattcagtgatttactccttactgcaaatggttaatgaaatgccag

Basic information

species Vitis vinifera
transcript Vv15s0048g02500.t01
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|349833342|gb|FQ416720.1|FQ416720
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|28966442|gb|CB345475.1|CB345475
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|30252790|gb|CB970341.1|CB970341
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|30320377|gb|CD003639.1|CD003639
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351053907|gb|FQ441673.1|FQ441673
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349810795|gb|FQ403038.1|FQ403038
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|29785922|gb|CB343280.2|CB343280
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351027229|gb|FQ444478.1|FQ444478
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351037130|gb|FQ456963.1|FQ456963
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110377310|gb|EC942375.1|EC942375
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349832757|gb|FQ422281.1|FQ422281
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351027843|gb|FQ448413.1|FQ448413
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349826381|gb|FQ417878.1|FQ417878
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351025129|gb|FQ433546.1|FQ433546
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110386339|gb|EC950927.1|EC950927
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110371870|gb|EC935997.1|EC935997
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349825430|gb|FQ419347.1|FQ419347
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351020374|gb|FQ445981.1|FQ445981
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|26263771|gb|CA814834.1|CA814834
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110370958|gb|EC934607.1|EC934607
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|34320137|gb|CF372891.1|CF372891
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATAAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828161|gb|FQ415489.1|FQ415489
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351043958|gb|FQ431389.1|FQ431389
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110382385|gb|EC939338.1|EC939338
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATAAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349824211|gb|FQ417598.1|FQ417598
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACNAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349825844|gb|FQ423139.1|FQ423139
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351012169|gb|FQ426891.1|FQ426891
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828840|gb|FQ419173.1|FQ419173
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828571|gb|FQ417313.1|FQ417313
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110370897|gb|EC934497.1|EC934497
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|26262848|gb|CA813911.1|CA813911
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349829194|gb|FQ419670.1|FQ419670
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828162|gb|FQ415490.1|FQ415490
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|29785480|gb|CB342522.2|CB342522
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349830164|gb|FQ420424.1|FQ420424
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACCAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349829701|gb|FQ421219.1|FQ421219
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351028636|gb|FQ446309.1|FQ446309
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351020181|gb|FQ445788.1|FQ445788
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351043743|gb|FQ431295.1|FQ431295
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349826694|gb|FQ418785.1|FQ418785
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110394208|gb|EC959534.1|EC959534
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349808637|gb|FQ405781.1|FQ405781
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351047319|gb|FQ451831.1|FQ451831
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACNAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|29784549|gb|CB345412.2|CB345412
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351025965|gb|FQ427977.1|FQ427977
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351019979|gb|FQ439796.1|FQ439796
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351013513|gb|FQ425544.1|FQ425544
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351018592|gb|FQ424699.1|FQ424699
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|26257703|gb|CA808766.1|CA808766
EST:     TGGTCTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351017735|gb|FQ436088.1|FQ436088
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACCAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351013914|gb|FQ434066.1|FQ434066
EST:     TGGTTTGCATACAAGAACCTAATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACNAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349819651|gb|FQ413535.1|FQ413535
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|26265833|gb|CA816896.1|CA816896
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|26258348|gb|CA809411.1|CA809411
EST:     TGGTCTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|18458347|gb|BM436625.1|BM436625
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACCAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110237507|gb|EC907678.1|EC907678
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAN                         GGATGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351051972|gb|FQ450663.1|FQ450663
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACNAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828760|gb|FQ418495.1|FQ418495
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351030422|gb|FQ432360.1|FQ432360
EST:     TGGTCTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|30252704|gb|CB970255.1|CB970255
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349827266|gb|FQ421539.1|FQ421539
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351012825|gb|FQ430388.1|FQ430388
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349826237|gb|FQ416042.1|FQ416042
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349828807|gb|FQ419140.1|FQ419140
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351024478|gb|FQ426287.1|FQ426287
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349827190|gb|FQ421463.1|FQ421463
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|110379659|gb|EC944871.1|EC944871
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATAAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351027636|gb|FQ446803.1|FQ446803
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|349830330|gb|FQ420590.1|FQ420590
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351040164|gb|FQ425250.1|FQ425250
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG
EST: gi|351017997|gb|FQ439163.1|FQ439163
EST:     TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAG                         GGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAGATAATAGGGAG
genomic: TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatca ... gaaatgccagGGAAGCTTTGATACAAAAAATCAAGGACACATACAAGGAAATAATAGGGAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGGTTTGCATACAAGAACCTGATTTTCAAACCAGACAGgtatgtatcaattctctatcaaaatcaaaaacaaaacctttacatctgattcattcagtgatttactccttactgcaaatggttaatgaaatgccag

- - - - - - AAGAAC