1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CGTCTGATCCTGTGTGGGTGATGAATGTTGTTCCTCCCCGCAAGCCATCAACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttactgtgtcatgtgctactcttgtctacggaataaatatgcacctgggttgaaatgaagtgttttagagtcatagattagccaccttcatatcg...
species | Vitis vinifera |
transcript | Vv15s0048g01990.t01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|110701114|gb|EE078359.1|EE078359
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAAGTCTTATTGGGGTCTACCATGATTG GTGCGAAGC-ATTCTCAACATACCCTCGGAACT-ATGATCTCATCCATGTAEST: gi|30300158|gb|CB976952.1|CB976952
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGA-GCCATTCTCAACATACCCTCGGA-CTTATGATCTCATCCATGTA
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTCCCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|29783073|gb|CB348973.2|CB348973
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|110425458|gb|EC991843.1|EC991843
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|34544982|gb|CF513214.1|CF513214
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|30300088|gb|CB976882.1|CB976882
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAACEST: gi|34545974|gb|CF514206.1|CF514206
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
EST: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTG GTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
genomic: ACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttact ... gtgctgatagGTGCGAGCCATTCTCAACATACCCTCGGACTTATGATCTCATCCATGTAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGTCTGATCCTGTGTGGGTGATGAATGTTGTTCCTCCCCGCAAGCCATCAACTCTGGGAGTCATTTATGACAGAGGTCTTATTGGGGTCTACCATGATTGgtgagttactgtgtcatgtgctactcttgtctacggaataaatatgcacctgggttgaaatgaagtgttttagagtcatagattagccaccttcatatcg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatgaa