1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGGTCAGAAACAAAGGGTTGCCATTGCTGGTGCTTTGGCAGAAGCGTGTAAAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattacttgatagactgagattttcttttatatcttcttgcacatctttcttgtcagtgtgcttggatgtgtcttgggctgcaactgtatgtgcta...
species | Vitis vinifera |
transcript | Vv04s0044g01320.t01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTTGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|30136356|gb|CB921694.1|CB921694
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|77579760|gb|DV218758.1|DV218758
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|71870537|gb|DT019592.1|DT019592
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|71875168|gb|DT024223.1|DT024223
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|71866041|gb|DT015096.1|DT015096
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTGEST: gi|77581718|gb|DV219803.1|DV219803
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
EST: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAG GTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
genomic: AAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattac ... tttttaccagGTCGGGGTGATAAAAGCAGTGAAGAACTCTGTGGATAGTTCAGGAGAAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTCAGAAACAAAGGGTTGCCATTGCTGGTGCTTTGGCAGAAGCGTGTAAAGTACTATTGCTAGATGAGCTCACAACATTCTTGGATGAAAATGATCAGgtattattacttgatagactgagattttcttttatatcttcttgcacatctttcttgtcagtgtgcttggatgtgtcttgggctgcaactgtatgtgcta
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