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TGACAAAGATGTTGTTGGAAAAAGGCTTGAAGAGATATACAAAAGGCTTGAGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCGgtcagttcacatatcttgtgttgttgatcacttgaaagtgcctgcttgatttgatcttcaaataagctaggaaacttgttgcaatattcaaaccgtctga...
species | Vitis vinifera |
transcript | Vv02s0025g02160.t01 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCG GGTCTCAGTTTCTCTCCAGAAATGCAGCATAAAGCGACAAAAACCTTTTCTEST: gi|352768712|gb|FQ467924.1|FQ467924
genomic: AGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCGgtcagttcac ... aaatttccagGGTCTCAGTTTCTCTCCAGAAATGCAGCATAAAGCGACAAAAACCTTTTCT
EST: AGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCG GGTCTCAGTTTCTCTCCCGAAATGCAGCATAAAGCGAC
genomic: AGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCGgtcagttcac ... aaatttccagGGTCTCAGTTTCTCTCCAGAAATGCAGCATAAAGCGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGACAAAGATGTTGTTGGAAAAAGGCTTGAAGAGATATACAAAAGGCTTGAGTTCATTGATGCATACTCCGCTGAGTCGCGTGCAGGTTCCATTCTTGCGgtcagttcacatatcttgtgttgttgatcacttgaaagtgcctgcttgatttgatcttcaaataagctaggaaacttgttgcaatattcaaaccgtctga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaataag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aggaaac