1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAGgtattttctttctcgacgtttggcttgtgagaaaatctagggaacaatgcaaatgcaattattttatgttgtttcattttcacaagaatttttagaattg...
species | Vitis vinifera |
transcript | Vv18s0001g14240.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAG TTCCGTACACACAAGGTAATCTACAGGCGATATGCTGGATTATTTTTCTCAEST: gi|71886235|gb|DT035290.1|DT035290
genomic: TTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAGgtattttctt ... tttcttgcagTTCCGTACACACAAGGTAATCTACAGGCGATATGCTGGATTATTTTTCTCA
EST: TTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAG TTCCGTACACACAAGGTAATCTACAGGCGATATGCTGGATTATTTTTCTCA
genomic: TTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAGgtattttctt ... tttcttgcagTTCCGTACACACAAGGTAATCTACAGGCGATATGCTGGATTATTTTTCTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCACCGATTGGTTGTCAACCGGGATCCCAAGTTCACTAACTTCGTTGAGgtattttctttctcgacgtttggcttgtgagaaaatctagggaacaatgcaaatgcaattattttatgttgtttcattttcacaagaatttttagaattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gagaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggaacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaatgcaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acaagaa