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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATAAATATCTCCAAAAAGTTCACTTTTCTCGGCATGCAATTCCACTTCCTGAGTTTATGCAGgtttgattatgttccttaggacttgaattaaggatatagttgctgattttgcaattgtttttaggccttagctgctgagattttagcattttgatagtgaaaatatggccaaagcag

Basic information

species Vitis vinifera
transcript Vv14s0081g00240.t01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv14s0081g00240.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA20G36930.1 (Glycine max), 5'ss of exon 4
GATAAATATCTCCAAAAAGTTCACTTTTCTCGGCATGCAATTCCACTTCCTGAGTTTATGCAGgtttgattatgttccttaggacttgaattaaggatatagttgctgat-tttgcaattgtttttaggccttagctgctgagattttagcattttgatagtgaaaatatggccaaagcag
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GATAAGTATCAGCAAAAGGTTCACTTCTCCCAGCATGGCATTCCACTTCCTGAGTTTATGAAGgtctg-tactgtttatcttggttataat--agtatttgaaaattcatctttaggatacgaattgaggataagtgaatatgttttgaacag----------------------------