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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcatatatacttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag

Basic information

species Vitis vinifera
transcript Vv14s0081g00010.t01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G138268_T01 (Zea mays), 5'ss of exon 4
GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagt---catatatacttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
||||||||||||||| ||||||||| | || || ||||||||||| || ||||| || || ||| ||| ||||||| || | | | | ||| | | | | |||| | | | | | || || || | | || | |||
GATGTTCGTCGAATCATGCAAGCGCCTTCGGATCATGAAAGGATCAGAAGCCATTGGCCTGGgtgagttgacatatatgattattattattactaatctcaacaacaaaa---gagactttctagggtagtaagcagcccgtttgtttcatctggtctctatctctgaattttccag

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GRMZM2G138268_T02 (Zea mays), 5'ss of exon 3
--------------------------------------GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagt---catatatacttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
||||||||||||||| ||||||||| | || || ||||||||||| || ||||| || || ||| ||| ||||||| || | | | | ||| | | | | |||| | | | | | || || || | | || | |||
TAATCGGAAAATAATAATAATTTCCATTTCATTTTCAGGATGTTCGTCGAATCATGCAAGCGCCTTCGGATCATGAAAGGATCAGAAGCCATTGGCCTGGgtgagttgacatatatgattattattattactaatctcaacaacaaaa---gagactttctagggtagtaagcagcccgtttgtttcatctggtctctatctctgaattttccag

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA20G36790.1 (Glycine max), 5'ss of exon 3
GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcatatatacttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
||||||||| ||||| |||||||| | |||||||||||||| |||||||| ||||| |||||||||||| ||||| || | | ||| ||| || | | | | || || || ||| | | ||||| | ||| |
GATGTTCGTTGAATCATGCAAGCGTCTTCGCATAATGAAAGGCTCCGAGGCAATCGGTCTTGgttagtcac-catactcact-tatcctatgttca--------------aagaaaattattatcttatcttacataaaattgtttattt--ctaattcacag-----------

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA03G40760.1 (Glycine max), 5'ss of exon 3
GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcatatatacttgctgcaac-tcatgatcattat-ggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
|||||||| ||||| ||||||||| |||| |||||||||||||| ||||| ||||| || ||||||| || | | | | || || ||| | || ||| | ||| | || || | || | | || ||||| |
AATGTTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGAGGCAATCGGGCTAGgttagtgatcttaattaacaaaaaagctattatcttaattaattaattaattaatgtgcattgaccgtgagg--ttgttattttttatttacag--------------------

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA10G30440.2 (Glycine max), 5'ss of exon 2
--------------------------------------GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcat-atata-cttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
|||||||| ||||| ||| ||||| | |||||||||||||| || ||||| ||||| ||||||||||||| ||| | ||| || | | | || | ||| | | |||||| | | | || || || || |||| |
ATCATTCCCTTATACTACTCTTTTTCACAATTTCACAGAATGTTCGTTGAATCATGCCAGCGCCTTCGCATAATGAAAGGTTCTGAGGCTATCGGCCTTGgttagtcatcatacaacttactcttaat--tcattactataagtcagaagaaaattattatc-ctaaaattg--tttatttcttattcacag----------------------

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA10G30440.3 (Glycine max), 5'ss of exon 3
GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcat-atata-cttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
|||||||| ||||| ||| ||||| | |||||||||||||| || ||||| ||||| ||||||||||||| ||| | ||| || | | | || | ||| | | |||||| | | | || || || || |||| |
AATGTTCGTTGAATCATGCCAGCGCCTTCGCATAATGAAAGGTTCTGAGGCTATCGGCCTTGgttagtcatcatacaacttactcttaat--tcattactataagtcagaagaaaattattatc-ctaaaattg--tttatttcttattcacag----------------------

upper sequence: Vv14s0081g00010.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA19G43450.1 (Glycine max), 5'ss of exon 3
GATGTTCGTCGAATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcatatatacttgctgcaactcatgatcattatggttatgttcaaaattttcaccacttttgctgacttaatctcttgtatttgcttgattaatcaatggcatgcag
|| |||| ||||| ||||||||| |||| |||||||||||||| | ||| ||||| || ||||||| || | | | | ||| | | || | | | || | | || || || | | | | | || || || | |
AATACTCGTGGAATCATGCAAGCGCCTGCGTATAATGAAAGGATCTGCGGCAATCGGGCTAGgttagtgatcttaattaagt----ttcaaattagccaaaaaaatatctta--tcttaattaattaatgcgaattgaccgtgaggttgttatttttttatttacag-------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110370217|gb|EC929130.1|EC929130
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|34363463|gb|CF405048.1|CF405048
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110386441|gb|EC951035.1|EC951035
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110357652|gb|EC921294.1|EC921294
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCC
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110358344|gb|EC922490.1|EC922490
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|34319372|gb|CF372126.1|CF372126
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|30321834|gb|CD005096.1|CD005096
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110382415|gb|EC939426.1|EC939426
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCCAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|30125491|gb|CB910830.1|CB910830
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110421032|gb|EC987319.1|EC987319
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110370114|gb|EC934294.1|EC934294
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110387706|gb|EC952397.1|EC952397
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110359936|gb|EC922298.1|EC922298
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110395704|gb|EC961374.1|EC961374
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|30129712|gb|CB915051.1|CB915051
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110389158|gb|EC953976.1|EC953976
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAA
EST: gi|32245124|gb|CD710943.1|CD710943
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|45771409|gb|CN007261.1|CN007261
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110360880|gb|EC924322.1|EC924322
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110421723|gb|EC988023.1|EC988023
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110726327|gb|EE102012.1|EE102012
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110357840|gb|EC921623.1|EC921623
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110424930|gb|EC991305.1|EC991305
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|18459524|gb|BM437802.1|BM437802
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110359559|gb|EC921247.1|EC921247
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|71874129|gb|DT023184.1|DT023184
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAG
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAG
EST: gi|110357411|gb|EC920932.1|EC920932
EST:     TCTTGGCA-GCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCCAGAGCA
genomic: TCTTG-CAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCA
EST: gi|110685504|gb|EE062284.1|EE062284
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCCAGAGCAGTGGAGAAGTGCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCA
EST: gi|22010332|gb|BQ795366.1|BQ795366
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|18458727|gb|BM437005.1|BM437005
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|26258642|gb|CA809705.1|CA809705
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|34414970|gb|CF413724.1|CF413724
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
EST: gi|110703290|gb|EE080007.1|EE080007
EST:     ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTG                         CCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA
genomic: ATCTTGCAAGCGCTTGCGCATAATGAAAGGATCCGAGGCCATCGGACTTGgttagtcata ... tggcatgcagCCCCAAGAGCAGTGGAGAAGTGCAAGAACAGAAGCTAGAGGCACCCATCCA