1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGTGTCTTATGATCCCAATCTGAGGCTTCCTCTGTGGCCATCTGCAGACAGTGCCAGGGAAGGTATCCTGAGCATATGGAATACTGCTGATATCATAAAGgtagtcatcatttttaaatgcacaattgtgggctcacaatgcatttttctcaactctatctagaagactgaggtacaatgtgatgtaaaaatgtaaatggaaatgcccccttctgatggttacatactaaatttatcatcag
species | Vitis vinifera |
transcript | Vv14s0006g01410.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTGCCAGGGAAGGCATCCTGAGCATATGGAATACTGCTGATATCATTAAG ATGAGTGAAGAAGAGATCTCTTTTCTAACAAAAGGAGAGGATCCATATGATEST: gi|30136156|gb|CB921494.1|CB921494
genomic: GTGCCAGGGAAGGTATCCTGAGCATATGGAATACTGCTGATATCATAAAGgtagtcatca ... ttatcatcagATGAGTGAAGAAGAGATCTCTTTTCTAACAAAAGGAGAGGATCCATATGAT
EST: GTGCCAGGGAAGGTATCCTGAGCATATGGAATACTGCTGATATCATTAAG ATGAGTGAAGAAGAGATCTCTTTTCTAACAAAAGGAGAGGATCCATATGAT
genomic: GTGCCAGGGAAGGTATCCTGAGCATATGGAATACTGCTGATATCATAAAGgtagtcatca ... ttatcatcagATGAGTGAAGAAGAGATCTCTTTTCTAACAAAAGGAGAGGATCCATATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGTCTTATGATCCCAATCTGAGGCTTCCTCTGTGGCCATCTGCAGACAGTGCCAGGGAAGGTATCCTGAGCATATGGAATACTGCTGATATCATAAAGgtagtcatcatttttaaatgcacaattgtgggctcacaatgcatttttctcaactctatctagaagactgaggtacaatgtgatgtaaaaatgtaaatggaaatgcccccttctgatggttacatactaaatttatcatcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT