1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATGAATGAAGTTAAACAGCATAGAATGGAAGGTTCCATGTGGACTGTTCTGAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAGgtatgaattggattttattatgctaaaatctcaactggacaaaattctgtgtctctgtatcttcaatggaattgtcatgatctaaattctgacgaggtta...
species | Vitis vinifera |
transcript | Vv13s0064g00450.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAT GTGTTGATATGCTAATGAAGGCGGTGGGGAAAGACTGCACATCTTTATTTAEST: gi|110390010|gb|EC954893.1|EC954893
genomic: GAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAGgtatgaattg ... cctttctcagGTGTTGATATGCTAATGAAGGCGGTGGGGAAAGACTGCACATCTTTATTTA
EST: GAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAG GTGTTGATATGCTAATGAAGGCGGTGGGGAAAGACTGCACATCTTTATTTA
genomic: GAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAGgtatgaattg ... cctttctcagGTGTTGATATGCTAATGAAGGCGGTGGGGAAAGACTGCACATCTTTATTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGAATGAAGTTAAACAGCATAGAATGGAAGGTTCCATGTGGACTGTTCTGAAAGGCCGTGTATACAATTTGTCTCCATATATGAAATTTCATCCTGGAGgtatgaattggattttattatgctaaaatctcaactggacaaaattctgtgtctctgtatcttcaatggaattgtcatgatctaaattctgacgaggtta
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gacaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aatggaat