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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGTAGCCGGACTAGCTGCAGATGGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttctagctgtatacacacacgcacacacacacatgtatctcaaatatgcttttaactccactgaataaggactgctaaatttgacagttgtaa...

Basic information

species Vitis vinifera
transcript Vv08s0040g00410.t01
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|34545358|gb|CF513590.1|CF513590
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|87584053|gb|DY473356.1|DY473356
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110712939|gb|EE088423.1|EE088423
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351026032|gb|FQ428044.1|FQ428044
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|26267610|gb|CA818673.1|CA818673
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGACTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351016637|gb|FQ424064.1|FQ424064
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110689940|gb|EE066605.1|EE066605
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|161710249|gb|FC058959.1|FC058959
EST:     GGGATGCATATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110405352|gb|EC970893.1|EC970893
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110719773|gb|EE095192.1|EE095192
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|37185131|gb|CF604484.1|CF604484
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110720841|gb|EE097126.1|EE097126
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|34545280|gb|CF513512.1|CF513512
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|161715533|gb|FC069462.1|FC069462
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGATGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|349829839|gb|FQ422152.1|FQ422152
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351012831|gb|FQ430394.1|FQ430394
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110428341|gb|EC994810.1|EC994810
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110702145|gb|EE080525.1|EE080525
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|71880094|gb|DT029149.1|DT029149
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351017561|gb|FQ435914.1|FQ435914
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|34543966|gb|CF512198.1|CF512198
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAATTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|71880613|gb|DT029668.1|DT029668
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110720821|gb|EE097078.1|EE097078
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110718292|gb|EE094957.1|EE094957
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351033938|gb|FQ462993.1|FQ462993
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110727594|gb|EE104529.1|EE104529
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|294963862|gb|GW836737.1|GW836737
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110707900|gb|EE084829.1|EE084829
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351023141|gb|FQ432524.1|FQ432524
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|349823527|gb|FQ414937.1|FQ414937
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|71879184|gb|DT028239.1|DT028239
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|161719434|gb|FC067375.1|FC067375
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351029065|gb|FQ435265.1|FQ435265
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|161712773|gb|FC061997.1|FC061997
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|22010249|gb|BQ795283.1|BQ795283
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110428899|gb|EC995383.1|EC995383
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|37184434|gb|CF603788.1|CF603788
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110713723|gb|EE089893.1|EE089893
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCTTGTGAAGGAACTTGCTGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|110686023|gb|EE063265.1|EE063265
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|30253109|gb|CB970660.1|CB970660
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAGG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
EST: gi|351021754|gb|FQ437139.1|FQ437139
EST:     GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAG                         TGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG
genomic: GGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttc ... ggctctgcagTGTGTATGGTGAAGCAATTCCTGTGAAGGAACTTGCCGAACGAGTGGCTAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCTGTAGCCGGACTAGCTGCAGATGGGAGGCAAATTGTTGCACGAGCCAAGGCTGAAGCCACCAATTATCAAAGgtttgctttctagctgtatacacacacgcacacacacacatgtatctcaaatatgcttttaactccactgaataaggactgctaaatttgacagttgtaa

- - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaataag