Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaaggcccacatttttataccatttattcacctctgttctctgctaaccgtttgcaattatcggcatttcag

Basic information

species Vitis vinifera
transcript Vv08s0007g07220.t01
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv08s0007g07220.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: LOC_Os01g01060.1 (Oryza sativa), 5'ss of exon 3
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaaggcccacattt-------ttataccatttattcacctctgttctc-tgctaaccgtttgcaattatcggcatttcag
|||| || || ||| | ||   ||| || |||||||| ||||| || ||||| ||  | |||||||| ||||||||||| || || || |||||||||||||| |    |   | |||||       | |  | | | |  || |  || |||  | || |    || ||                
TCACCACTGGCGCCAGGGAGAGTGCCTTTAGGAACATCAAGACCATTGCTGAGTGCCTTGCTGATGAGCTCATCAATGCCGCCAAGGGCTCATCCAACAGgtaaatcttgcttctcatttgatgaaatgaggctactgacacatccatgctctaattctgatatgttacag---------------

upper sequence: Vv08s0007g07220.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA09G15680.2 (Glycine max), 5'ss of exon 3
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaa----aaggcccacatt-----tttataccatttat----tcacctctgttctctgctaaccgtttgcaattatcggcatttcag--------
| || || || || || ||| |||||||||| ||||| |||||||| |||||||| |||||||||||||| || ||||| || |||||||||||||||||||| |      ||    |  |||     | | |||  ||| |    | |  |   || | |  |    | ||    | |  | |||| | |        
TAACAACAGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCTGATGAACTTATTAATGCAGCTAAAGGTTCATCCAACAGgtatactttttaacattcctattcatggtgtgtacattttctgatgtaattttgattttttttttgttggttttgctgaatgacattactgtatttcag

upper sequence: Vv08s0007g07220.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: GLYMA02G26840.1 (Glycine max), 5'ss of exon 4
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaaggc--ccacatttttataccatttattcacctctgttctctgctaaccgtttgcaattatcggcatttcag---------------
| || || || || || ||| |||||||||| ||||| |||||||| |||||||| ||||| |||||||| || ||||| || |||||||||||||| ||||| |     ||   |  |||  | || |||  |||    | |||  | |   |    ||||    | | |     | |                
TAACAACAGGTGCTCGGGAAGCTGCTTTCAGAAACATCAAGACAATTGCTGAATGCTTGGCCGATGAACTTATTAATGCAGCCAAAGGTTCATCCAATAGgtatacttttgcaatcctattcatttaacatacatttttgtttgtcattttaaatttttttgttggttttgttgaataatatttctcaatttcag

upper sequence: Vv08s0007g07220.t01 (Vitis vinifera), 5'ss of exon 4
lower sequence: PP1S10_385V6.1 (Physcomitrella patens), 5'ss of exon 3
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaa---aggcccacatttttatacc--atttattcac--ctctgttctctgctaa--ccgtttgcaattatcggcatttcag---------------------
| ||||| || || ||||| ||||||||||||||||| ||||| || || || || |||||||| ||| | || || || || ||||| || ||||||||||| ||       | | || || || |  |  | |||   |   |    |||| |  | |  ||  || || || || | | |                         
TTACTACTGGTGCGCGAGAGTCTGCTTTCAGGAACATCAAGACCATTGCAGAGTGCTTGGCTGACGAATTAATTAACGCAGCTAAAGGGTCTTCCAACAGgtaaaatgcttgagacaaccttgttttgtctgaattacatatggcgtcattctgttttgatacctgttacacttctctggactgataaaaggttgttgcttgttccag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|30254478|gb|CB971223.1|CB971223
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|349829758|gb|FQ421276.1|FQ421276
EST:     GAATGTCTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|22007543|gb|BQ792577.1|BQ792577
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110397360|gb|EC963092.1|EC963092
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|77585543|gb|DV221862.1|DV221862
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCCACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110702552|gb|EE081396.1|EE081396
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110386863|gb|EC951495.1|EC951495
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|77587163|gb|DV222711.1|DV222711
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|37189341|gb|CF608690.1|CF608690
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110366734|gb|EC930652.1|EC930652
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110690648|gb|EE067989.1|EE067989
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCCAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110381808|gb|EC935439.1|EC935439
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110362066|gb|EC925573.1|EC925573
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110384813|gb|EC949278.1|EC949278
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110724236|gb|EE099885.1|EE099885
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|30137959|gb|CB923297.1|CB923297
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110693070|gb|EE068978.1|EE068978
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71887184|gb|DT036239.1|DT036239
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110727075|gb|EE103444.1|EE103444
EST:     AATGTTTGGCTGATGAACTCATCAATGCTGGCAAA-GGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCCAAGGCCCAACC
genomic: AATGTTTGGCTGATGAACTCATCAATGCTG-CAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCC-AACC
EST: gi|77581678|gb|DV219784.1|DV219784
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110686765|gb|EE064773.1|EE064773
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71887190|gb|DT036245.1|DT036245
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71881593|gb|DT030648.1|DT030648
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|30128424|gb|CB913763.1|CB913763
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|32460578|gb|CD801752.1|CD801752
EST:     GAATGTTTGGCTGAAGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|161719032|gb|FC067652.1|FC067652
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110691236|gb|EE069106.1|EE069106
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110698863|gb|EE076849.1|EE076849
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|351030727|gb|FQ438565.1|FQ438565
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110377556|gb|EC942629.1|EC942629
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110378204|gb|EC943323.1|EC943323
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110693611|gb|EE069995.1|EE069995
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCCAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110365695|gb|EC929082.1|EC929082
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110689077|gb|EE064986.1|EE064986
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCCAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110363572|gb|EC927170.1|EC927170
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71872129|gb|DT021184.1|DT021184
EST:     AACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: AACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110730006|gb|EE106594.1|EE106594
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110391483|gb|EC956461.1|EC956461
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110395107|gb|EC960667.1|EC960667
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|32458579|gb|CD799753.1|CD799753
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110423163|gb|EC989503.1|EC989503
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|30132798|gb|CB918137.1|CB918137
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71872841|gb|DT021896.1|DT021896
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|77579066|gb|DV218359.1|DV218359
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71870145|gb|DT019200.1|DT019200
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71886765|gb|DT035820.1|DT035820
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71889934|gb|DT038989.1|DT038989
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110360526|gb|EC923702.1|EC923702
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110375420|gb|EC940408.1|EC940408
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110401620|gb|EC968235.1|EC968235
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110702525|gb|EE081337.1|EE081337
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCCATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCCACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71888848|gb|DT037903.1|DT037903
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71889883|gb|DT038938.1|DT038938
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110729763|gb|EE106071.1|EE106071
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110701952|gb|EE080108.1|EE080108
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110402707|gb|EC960816.1|EC960816
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110414743|gb|EC980594.1|EC980594
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|30129801|gb|CB915140.1|CB915140
EST:     GGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110714778|gb|EE092075.1|EE092075
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|351019313|gb|FQ429473.1|FQ429473
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|22014248|gb|BQ799282.1|BQ799282
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110717318|gb|EE093071.1|EE093071
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110379947|gb|EC945174.1|EC945174
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110414140|gb|EC979966.1|EC979966
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110715709|gb|EE094070.1|EE094070
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|77588790|gb|DV223618.1|DV223618
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110390058|gb|EC954943.1|EC954943
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110410333|gb|EC976014.1|EC976014
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110724060|gb|EE099555.1|EE099555
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|37188857|gb|CF608206.1|CF608206
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110367197|gb|EC931123.1|EC931123
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110419671|gb|EC985919.1|EC985919
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|30254126|gb|CB971141.1|CB971141
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCACCAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110695988|gb|EE074637.1|EE074637
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAGGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|351041459|gb|FQ447586.1|FQ447586
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|51052543|gb|CO819613.1|CO819613
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|71866103|gb|DT015158.1|DT015158
EST:     TGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: TGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
EST: gi|110402662|gb|EC960696.1|EC960696
EST:     GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAG                         TTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG
genomic: GAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaag ... ggcatttcagTTATGCAATCAAGAAAAAGGATGAGATCGAGAGAGTTGCAAAGGCCAACCG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TCACTACCGGAGCCCGAGAATCTGCTTTCAGGAACATAAAGACAATAGCTGAATGTTTGGCTGATGAACTCATCAATGCTGCAAAAGGTTCATCCAACAGgtacaaaaaggcccacatttttataccatttattcacctctgttctctgctaaccgtttgcaattatcggcatttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC